Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF43Q68DV7 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF43Q68DV7 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF43Q68DV7 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF43Q68DV7 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF43Q68DV7 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF43Q68DV7 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF43Q68DV7 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF43Q68DV7 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.04■□□□□ 0.16
RNF43Q68DV7 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF43Q68DV7 BRWD1P1-201ENST00000401091 371 ntBASIC16.04■□□□□ 0.16
RNF43Q68DV7 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF43Q68DV7 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.04■□□□□ 0.16
RNF43Q68DV7 RPL13AP25-201ENST00000484130 612 ntBASIC16.04■□□□□ 0.16
RNF43Q68DV7 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.04■□□□□ 0.16
RNF43Q68DV7 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.04■□□□□ 0.16
RNF43Q68DV7 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF43Q68DV7 AL359711.2-201ENST00000563105 872 ntBASIC16.04■□□□□ 0.16
RNF43Q68DV7 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF43Q68DV7 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
RNF43Q68DV7 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.04■□□□□ 0.16
RNF43Q68DV7 AL049840.4-201ENST00000602422 811 ntBASIC16.04■□□□□ 0.16
RNF43Q68DV7 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF43Q68DV7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.04■□□□□ 0.16
RNF43Q68DV7 MIR6869-201ENST00000619434 62 ntBASIC16.04■□□□□ 0.16
RNF43Q68DV7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF43Q68DV7 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF43Q68DV7 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF43Q68DV7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF43Q68DV7 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF43Q68DV7 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF43Q68DV7 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF43Q68DV7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF43Q68DV7 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF43Q68DV7 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF43Q68DV7 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.03■□□□□ 0.16
RNF43Q68DV7 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RNF43Q68DV7 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF43Q68DV7 AGAP7P-201ENST00000582299 2062 ntBASIC16.03■□□□□ 0.16
RNF43Q68DV7 AGAP14-201ENST00000624701 2060 ntBASIC16.03■□□□□ 0.16
RNF43Q68DV7 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RNF43Q68DV7 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF43Q68DV7 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF43Q68DV7 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNF43Q68DV7 ANKRD19P-201ENST00000338192 862 ntBASIC16.03■□□□□ 0.16
RNF43Q68DV7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RNF43Q68DV7 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
RNF43Q68DV7 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.03■□□□□ 0.16
RNF43Q68DV7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF43Q68DV7 AC004945.1-201ENST00000416738 983 ntBASIC16.03■□□□□ 0.16
RNF43Q68DV7 AL162726.2-201ENST00000438986 1017 ntBASIC16.03■□□□□ 0.16
RNF43Q68DV7 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNF43Q68DV7 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.03■□□□□ 0.16
RNF43Q68DV7 ENPP7P5-201ENST00000541031 1031 ntBASIC16.03■□□□□ 0.16
RNF43Q68DV7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNF43Q68DV7 AC120045.2-201ENST00000567334 178 ntBASIC16.03■□□□□ 0.16
RNF43Q68DV7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNF43Q68DV7 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.03■□□□□ 0.16
RNF43Q68DV7 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.03■□□□□ 0.16
RNF43Q68DV7 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.03■□□□□ 0.16
RNF43Q68DV7 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.03■□□□□ 0.16
RNF43Q68DV7 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.03■□□□□ 0.16
RNF43Q68DV7 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RNF43Q68DV7 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.03■□□□□ 0.16
RNF43Q68DV7 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.03■□□□□ 0.16
RNF43Q68DV7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNF43Q68DV7 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RNF43Q68DV7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RNF43Q68DV7 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RNF43Q68DV7 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNF43Q68DV7 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF43Q68DV7 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF43Q68DV7 AC139749.1-202ENST00000617529 3139 ntBASIC16.03■□□□□ 0.16
RNF43Q68DV7 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF43Q68DV7 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.02■□□□□ 0.16
RNF43Q68DV7 DRD5P1-201ENST00000456605 1438 ntBASIC16.02■□□□□ 0.16
RNF43Q68DV7 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
RNF43Q68DV7 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF43Q68DV7 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF43Q68DV7 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF43Q68DV7 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.02■□□□□ 0.16
RNF43Q68DV7 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.02■□□□□ 0.16
RNF43Q68DV7 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF43Q68DV7 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RNF43Q68DV7 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.02■□□□□ 0.16
RNF43Q68DV7 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.02■□□□□ 0.16
RNF43Q68DV7 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF43Q68DV7 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF43Q68DV7 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
RNF43Q68DV7 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF43Q68DV7 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF43Q68DV7 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RNF43Q68DV7 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.02■□□□□ 0.16
RNF43Q68DV7 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.02■□□□□ 0.16
RNF43Q68DV7 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.02■□□□□ 0.16
RNF43Q68DV7 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.02■□□□□ 0.16
RNF43Q68DV7 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RNF43Q68DV7 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RNF43Q68DV7 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
RNF43Q68DV7 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms