Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.41■□□□□ 0.06
WNT3AP56704 AL137783.1-201ENST00000623494 1896 ntBASIC15.41■□□□□ 0.06
WNT3AP56704 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
WNT3AP56704 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
WNT3AP56704 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
WNT3AP56704 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
WNT3AP56704 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
WNT3AP56704 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
WNT3AP56704 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
WNT3AP56704 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
WNT3AP56704 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
WNT3AP56704 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
WNT3AP56704 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.41■□□□□ 0.06
WNT3AP56704 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
WNT3AP56704 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
WNT3AP56704 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
WNT3AP56704 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
WNT3AP56704 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
WNT3AP56704 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
WNT3AP56704 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
WNT3AP56704 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.4■□□□□ 0.06
WNT3AP56704 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
WNT3AP56704 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.4■□□□□ 0.06
WNT3AP56704 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
WNT3AP56704 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.4■□□□□ 0.06
WNT3AP56704 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
WNT3AP56704 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
WNT3AP56704 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
WNT3AP56704 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
WNT3AP56704 RNU1-114P-201ENST00000365297 166 ntBASIC15.4■□□□□ 0.06
WNT3AP56704 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.4■□□□□ 0.06
WNT3AP56704 AL139094.1-201ENST00000405549 1188 ntBASIC15.4■□□□□ 0.06
WNT3AP56704 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.4■□□□□ 0.06
WNT3AP56704 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
WNT3AP56704 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.4■□□□□ 0.06
WNT3AP56704 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
WNT3AP56704 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.4■□□□□ 0.06
WNT3AP56704 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.4■□□□□ 0.06
WNT3AP56704 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.4■□□□□ 0.06
WNT3AP56704 AC138761.1-201ENST00000584393 385 ntBASIC15.4■□□□□ 0.06
WNT3AP56704 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
WNT3AP56704 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
WNT3AP56704 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.4■□□□□ 0.06
WNT3AP56704 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.4■□□□□ 0.06
WNT3AP56704 CU634019.7-201ENST00000624153 1185 ntBASIC15.4■□□□□ 0.06
WNT3AP56704 FP236241.2-201ENST00000624906 1185 ntBASIC15.4■□□□□ 0.06
WNT3AP56704 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
WNT3AP56704 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
WNT3AP56704 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.4■□□□□ 0.06
WNT3AP56704 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
WNT3AP56704 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
WNT3AP56704 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
WNT3AP56704 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
WNT3AP56704 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
WNT3AP56704 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
WNT3AP56704 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
WNT3AP56704 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
WNT3AP56704 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
WNT3AP56704 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
WNT3AP56704 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.4■□□□□ 0.06
WNT3AP56704 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
WNT3AP56704 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
WNT3AP56704 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.4■□□□□ 0.06
WNT3AP56704 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.4■□□□□ 0.06
WNT3AP56704 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.39■□□□□ 0.06
WNT3AP56704 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
WNT3AP56704 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
WNT3AP56704 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.39■□□□□ 0.05
WNT3AP56704 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
WNT3AP56704 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
WNT3AP56704 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.39■□□□□ 0.05
WNT3AP56704 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
WNT3AP56704 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.39■□□□□ 0.05
WNT3AP56704 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
WNT3AP56704 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
WNT3AP56704 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
WNT3AP56704 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
WNT3AP56704 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
WNT3AP56704 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
WNT3AP56704 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.39■□□□□ 0.05
WNT3AP56704 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
WNT3AP56704 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.39■□□□□ 0.05
WNT3AP56704 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
WNT3AP56704 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
WNT3AP56704 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.39■□□□□ 0.05
WNT3AP56704 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.39■□□□□ 0.05
WNT3AP56704 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.39■□□□□ 0.05
WNT3AP56704 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.39■□□□□ 0.05
WNT3AP56704 CLUHP6-201ENST00000580789 941 ntBASIC15.39■□□□□ 0.05
WNT3AP56704 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.39■□□□□ 0.05
WNT3AP56704 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.39■□□□□ 0.05
WNT3AP56704 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
WNT3AP56704 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
WNT3AP56704 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
WNT3AP56704 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.39■□□□□ 0.05
WNT3AP56704 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
WNT3AP56704 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
WNT3AP56704 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.39■□□□□ 0.05
WNT3AP56704 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.39■□□□□ 0.05
WNT3AP56704 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms