Protein–RNA interactions for Protein: P52799

EFNB2, Ephrin-B2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2P52799 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.25□□□□□ -0.29
EFNB2P52799 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNB2P52799 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.25□□□□□ -0.29
EFNB2P52799 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNB2P52799 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
EFNB2P52799 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNB2P52799 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
EFNB2P52799 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNB2P52799 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNB2P52799 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.25□□□□□ -0.29
EFNB2P52799 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
EFNB2P52799 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
EFNB2P52799 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNB2P52799 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
EFNB2P52799 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.25□□□□□ -0.29
EFNB2P52799 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.25□□□□□ -0.29
EFNB2P52799 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
EFNB2P52799 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB2P52799 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.24□□□□□ -0.29
EFNB2P52799 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
EFNB2P52799 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB2P52799 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB2P52799 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB2P52799 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.24□□□□□ -0.29
EFNB2P52799 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
EFNB2P52799 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.24□□□□□ -0.29
EFNB2P52799 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB2P52799 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB2P52799 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
EFNB2P52799 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB2P52799 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.24□□□□□ -0.29
EFNB2P52799 AC152010.1-201ENST00000415779 2006 ntBASIC13.24□□□□□ -0.29
EFNB2P52799 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
EFNB2P52799 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB2P52799 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
EFNB2P52799 AC097376.2-205ENST00000610159 5334 ntBASIC13.24□□□□□ -0.29
EFNB2P52799 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB2P52799 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
EFNB2P52799 BEND3P1-201ENST00000421591 1944 ntBASIC13.24□□□□□ -0.29
EFNB2P52799 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB2P52799 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB2P52799 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB2P52799 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB2P52799 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.24□□□□□ -0.29
EFNB2P52799 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.24□□□□□ -0.29
EFNB2P52799 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.24□□□□□ -0.29
EFNB2P52799 AC067863.1-201ENST00000494933 530 ntBASIC13.24□□□□□ -0.29
EFNB2P52799 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.24□□□□□ -0.29
EFNB2P52799 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB2P52799 SPCS2P1-201ENST00000561636 679 ntBASIC13.24□□□□□ -0.29
EFNB2P52799 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.24□□□□□ -0.29
EFNB2P52799 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.24□□□□□ -0.29
EFNB2P52799 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
EFNB2P52799 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.24□□□□□ -0.29
EFNB2P52799 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.24□□□□□ -0.29
EFNB2P52799 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB2P52799 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
EFNB2P52799 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB2P52799 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB2P52799 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB2P52799 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.24□□□□□ -0.29
EFNB2P52799 AC092135.3-201ENST00000624151 1846 ntBASIC13.24□□□□□ -0.29
EFNB2P52799 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB2P52799 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.24□□□□□ -0.29
EFNB2P52799 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB2P52799 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB2P52799 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
EFNB2P52799 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB2P52799 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
EFNB2P52799 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB2P52799 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.23□□□□□ -0.29
EFNB2P52799 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
EFNB2P52799 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB2P52799 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB2P52799 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.23□□□□□ -0.29
EFNB2P52799 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
EFNB2P52799 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
EFNB2P52799 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB2P52799 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB2P52799 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.23□□□□□ -0.29
EFNB2P52799 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB2P52799 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB2P52799 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB2P52799 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.23□□□□□ -0.29
EFNB2P52799 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB2P52799 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB2P52799 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
EFNB2P52799 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.23□□□□□ -0.29
EFNB2P52799 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.23□□□□□ -0.29
EFNB2P52799 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB2P52799 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB2P52799 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB2P52799 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB2P52799 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB2P52799 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB2P52799 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB2P52799 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
EFNB2P52799 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB2P52799 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB2P52799 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms