Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAPDHP04406 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAPDHP04406 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAPDHP04406 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAPDHP04406 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.85□□□□□ -0.35
GAPDHP04406 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAPDHP04406 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAPDHP04406 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
GAPDHP04406 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAPDHP04406 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAPDHP04406 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAPDHP04406 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAPDHP04406 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
GAPDHP04406 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
GAPDHP04406 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAPDHP04406 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.85□□□□□ -0.35
GAPDHP04406 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAPDHP04406 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.85□□□□□ -0.35
GAPDHP04406 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
GAPDHP04406 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAPDHP04406 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.85□□□□□ -0.35
GAPDHP04406 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
GAPDHP04406 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GAPDHP04406 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GAPDHP04406 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
GAPDHP04406 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.84□□□□□ -0.35
GAPDHP04406 LINC01230-201ENST00000625222 3017 ntBASIC12.84□□□□□ -0.35
GAPDHP04406 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GAPDHP04406 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
GAPDHP04406 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GAPDHP04406 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.84□□□□□ -0.35
GAPDHP04406 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GAPDHP04406 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GAPDHP04406 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GAPDHP04406 AC127383.1-201ENST00000444697 1800 ntBASIC12.84□□□□□ -0.35
GAPDHP04406 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GAPDHP04406 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
GAPDHP04406 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.84□□□□□ -0.35
GAPDHP04406 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.84□□□□□ -0.35
GAPDHP04406 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GAPDHP04406 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
GAPDHP04406 MIR943-201ENST00000401286 94 ntBASIC12.84□□□□□ -0.35
GAPDHP04406 AC136604.1-201ENST00000418535 575 ntBASIC12.84□□□□□ -0.35
GAPDHP04406 AL080243.2-201ENST00000418783 582 ntBASIC12.84□□□□□ -0.35
GAPDHP04406 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GAPDHP04406 IGHV3-42-201ENST00000520410 361 ntBASIC12.84□□□□□ -0.35
GAPDHP04406 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.84□□□□□ -0.35
GAPDHP04406 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GAPDHP04406 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GAPDHP04406 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
GAPDHP04406 AL138828.2-201ENST00000615812 383 ntBASIC12.84□□□□□ -0.35
GAPDHP04406 SPDYE12P-201ENST00000618416 771 ntBASIC12.84□□□□□ -0.35
GAPDHP04406 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.84□□□□□ -0.35
GAPDHP04406 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.84□□□□□ -0.35
GAPDHP04406 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GAPDHP04406 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GAPDHP04406 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
GAPDHP04406 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
GAPDHP04406 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GAPDHP04406 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.84□□□□□ -0.35
GAPDHP04406 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.84□□□□□ -0.35
GAPDHP04406 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
GAPDHP04406 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GAPDHP04406 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
GAPDHP04406 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.84□□□□□ -0.35
GAPDHP04406 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
GAPDHP04406 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.84□□□□□ -0.35
GAPDHP04406 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GAPDHP04406 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.35
GAPDHP04406 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
GAPDHP04406 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
GAPDHP04406 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.83□□□□□ -0.35
GAPDHP04406 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
GAPDHP04406 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.83□□□□□ -0.35
GAPDHP04406 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.83□□□□□ -0.35
GAPDHP04406 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
GAPDHP04406 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
GAPDHP04406 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
GAPDHP04406 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GAPDHP04406 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GAPDHP04406 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.83□□□□□ -0.36
GAPDHP04406 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
GAPDHP04406 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.83□□□□□ -0.36
GAPDHP04406 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GAPDHP04406 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GAPDHP04406 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.83□□□□□ -0.36
GAPDHP04406 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GAPDHP04406 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GAPDHP04406 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.83□□□□□ -0.36
GAPDHP04406 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GAPDHP04406 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GAPDHP04406 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GAPDHP04406 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
GAPDHP04406 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
GAPDHP04406 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
GAPDHP04406 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.83□□□□□ -0.36
GAPDHP04406 HIST3H2BA-201ENST00000436555 524 ntBASIC12.83□□□□□ -0.36
GAPDHP04406 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GAPDHP04406 RN7SL618P-201ENST00000477850 296 ntBASIC12.83□□□□□ -0.36
GAPDHP04406 HNRNPUP1-201ENST00000554987 333 ntBASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms