Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDZRN3Q9UPQ7 AC244669.2-201ENST00000612320 853 ntBASIC19.68■□□□□ 0.74
PDZRN3Q9UPQ7 PPA1-206ENST00000625364 644 ntTSL 5 BASIC19.68■□□□□ 0.74
PDZRN3Q9UPQ7 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDZRN3Q9UPQ7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC19.68■□□□□ 0.74
PDZRN3Q9UPQ7 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDZRN3Q9UPQ7 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDZRN3Q9UPQ7 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDZRN3Q9UPQ7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDZRN3Q9UPQ7 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDZRN3Q9UPQ7 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
PDZRN3Q9UPQ7 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 TEX30-203ENST00000376022 828 ntTSL 2 BASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 AC106760.1-201ENST00000508690 800 ntBASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 AC093813.1-201ENST00000605066 256 ntBASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 AC106881.1-201ENST00000605849 3329 ntBASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDZRN3Q9UPQ7 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 AC023024.2-201ENST00000623561 1993 ntBASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 ARTN-209ENST00000479128 471 ntTSL 3 BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 RHOQP1-201ENST00000555758 579 ntBASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 COG4-212ENST00000564653 590 ntTSL 5 BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 AL118558.3-201ENST00000607414 1079 ntBASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.66■□□□□ 0.74
PDZRN3Q9UPQ7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 AC148477.4-201ENST00000613430 1793 ntBASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms