Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
RAB40CQ96S21 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RAB40CQ96S21 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
RAB40CQ96S21 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
RAB40CQ96S21 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
RAB40CQ96S21 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
RAB40CQ96S21 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB40CQ96S21 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB40CQ96S21 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.45□□□□□ -0.42
RAB40CQ96S21 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.45□□□□□ -0.42
RAB40CQ96S21 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB40CQ96S21 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB40CQ96S21 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.45□□□□□ -0.42
RAB40CQ96S21 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB40CQ96S21 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.45□□□□□ -0.42
RAB40CQ96S21 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB40CQ96S21 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC12.45□□□□□ -0.42
RAB40CQ96S21 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RAB40CQ96S21 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.45□□□□□ -0.42
RAB40CQ96S21 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB40CQ96S21 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
RAB40CQ96S21 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC12.45□□□□□ -0.42
RAB40CQ96S21 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC12.45□□□□□ -0.42
RAB40CQ96S21 TPT1P11-201ENST00000458482 498 ntBASIC12.45□□□□□ -0.42
RAB40CQ96S21 SMN2-210ENST00000511812 867 ntTSL 2 BASIC12.45□□□□□ -0.42
RAB40CQ96S21 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC12.45□□□□□ -0.42
RAB40CQ96S21 AL645728.2-202ENST00000641679 227 ntBASIC12.45□□□□□ -0.42
RAB40CQ96S21 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB40CQ96S21 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB40CQ96S21 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB40CQ96S21 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB40CQ96S21 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RAB40CQ96S21 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
RAB40CQ96S21 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.45□□□□□ -0.42
RAB40CQ96S21 AC055811.4-201ENST00000624039 1754 ntBASIC12.45□□□□□ -0.42
RAB40CQ96S21 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB40CQ96S21 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.45□□□□□ -0.42
RAB40CQ96S21 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
RAB40CQ96S21 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RAB40CQ96S21 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.45□□□□□ -0.42
RAB40CQ96S21 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RAB40CQ96S21 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
RAB40CQ96S21 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.45□□□□□ -0.42
RAB40CQ96S21 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB40CQ96S21 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RAB40CQ96S21 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB40CQ96S21 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC12.45□□□□□ -0.42
RAB40CQ96S21 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB40CQ96S21 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB40CQ96S21 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB40CQ96S21 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.44□□□□□ -0.42
RAB40CQ96S21 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB40CQ96S21 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB40CQ96S21 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RAB40CQ96S21 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.44□□□□□ -0.42
RAB40CQ96S21 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RAB40CQ96S21 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB40CQ96S21 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.44□□□□□ -0.42
RAB40CQ96S21 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB40CQ96S21 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
RAB40CQ96S21 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.44□□□□□ -0.42
RAB40CQ96S21 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.44□□□□□ -0.42
RAB40CQ96S21 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB40CQ96S21 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
RAB40CQ96S21 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB40CQ96S21 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
RAB40CQ96S21 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
RAB40CQ96S21 BEX3-201ENST00000361298 921 ntTSL 2 BASIC12.44□□□□□ -0.42
RAB40CQ96S21 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB40CQ96S21 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB40CQ96S21 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
RAB40CQ96S21 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.44□□□□□ -0.42
RAB40CQ96S21 AC007967.2-201ENST00000432613 625 ntBASIC12.44□□□□□ -0.42
RAB40CQ96S21 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.44□□□□□ -0.42
RAB40CQ96S21 AC106730.1-201ENST00000566722 1090 ntBASIC12.44□□□□□ -0.42
RAB40CQ96S21 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.44□□□□□ -0.42
RAB40CQ96S21 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RAB40CQ96S21 AC064836.3-201ENST00000607928 673 ntBASIC12.44□□□□□ -0.42
RAB40CQ96S21 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.44□□□□□ -0.42
RAB40CQ96S21 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB40CQ96S21 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.44□□□□□ -0.42
RAB40CQ96S21 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RAB40CQ96S21 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB40CQ96S21 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB40CQ96S21 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB40CQ96S21 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB40CQ96S21 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
RAB40CQ96S21 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB40CQ96S21 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
RAB40CQ96S21 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB40CQ96S21 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
RAB40CQ96S21 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.44□□□□□ -0.42
RAB40CQ96S21 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
RAB40CQ96S21 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB40CQ96S21 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.44□□□□□ -0.42
RAB40CQ96S21 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB40CQ96S21 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
RAB40CQ96S21 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
RAB40CQ96S21 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RAB40CQ96S21 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms