Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 AC004835.2-201ENST00000603762 682 ntBASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 AC018529.2-202ENST00000611482 3087 ntBASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 LINC00628-201ENST00000628516 1289 ntBASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCNYL1Q8N7R7 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCNYL1Q8N7R7 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCNYL1Q8N7R7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCNYL1Q8N7R7 AC012508.2-201ENST00000567613 1472 ntBASIC15.14■□□□□ 0.01
CCNYL1Q8N7R7 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCNYL1Q8N7R7 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCNYL1Q8N7R7 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCNYL1Q8N7R7 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCNYL1Q8N7R7 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
CCNYL1Q8N7R7 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.14■□□□□ 0.01
CCNYL1Q8N7R7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.14■□□□□ 0.01
CCNYL1Q8N7R7 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCNYL1Q8N7R7 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.14■□□□□ 0.01
CCNYL1Q8N7R7 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCNYL1Q8N7R7 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCNYL1Q8N7R7 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCNYL1Q8N7R7 CETN4P-206ENST00000642099 2168 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms