Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 SNX18-202ENST00000343017 3140 ntBASIC15.66■□□□□ 0.1
CASC4Q6P4E1 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.66■□□□□ 0.1
CASC4Q6P4E1 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 GHSR-202ENST00000427970 912 ntBASIC15.66■□□□□ 0.1
CASC4Q6P4E1 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 RPL13P2-201ENST00000440687 659 ntBASIC15.66■□□□□ 0.1
CASC4Q6P4E1 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 AC069120.2-201ENST00000524091 540 ntBASIC15.66■□□□□ 0.1
CASC4Q6P4E1 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 AC023908.3-201ENST00000564211 3047 ntBASIC15.65■□□□□ 0.1
CASC4Q6P4E1 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 AL121723.1-201ENST00000445194 1519 ntBASIC15.65■□□□□ 0.1
CASC4Q6P4E1 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 AL359258.3-201ENST00000622910 2331 ntBASIC15.65■□□□□ 0.1
CASC4Q6P4E1 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 AC139749.1-202ENST00000617529 3139 ntBASIC15.65■□□□□ 0.1
CASC4Q6P4E1 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 REXO1L2P-201ENST00000425429 2069 ntBASIC15.65■□□□□ 0.1
CASC4Q6P4E1 AC232323.1-201ENST00000540724 2099 ntBASIC15.65■□□□□ 0.1
CASC4Q6P4E1 REXO1L5P-201ENST00000622260 2098 ntBASIC15.65■□□□□ 0.1
CASC4Q6P4E1 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 AL139400.1-201ENST00000366220 510 ntBASIC15.65■□□□□ 0.1
CASC4Q6P4E1 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 KLF2P3-201ENST00000451977 1087 ntBASIC15.65■□□□□ 0.1
CASC4Q6P4E1 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 KRT18P43-201ENST00000469825 1281 ntBASIC15.65■□□□□ 0.1
CASC4Q6P4E1 AC027369.6-201ENST00000525520 931 ntBASIC15.65■□□□□ 0.1
CASC4Q6P4E1 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 AC010336.2-201ENST00000564226 506 ntBASIC15.65■□□□□ 0.1
CASC4Q6P4E1 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms