Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 SNX18-202ENST00000343017 3140 ntBASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 EIF3FP3-201ENST00000434851 1086 ntBASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 HMGN1P19-201ENST00000436976 333 ntBASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 AP005019.2-201ENST00000615104 511 ntBASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 RPSAP52-203ENST00000622976 1023 ntBASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 AC097359.2-201ENST00000604992 2389 ntBASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 AC113367.3-201ENST00000508316 1912 ntBASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 AC026748.1-201ENST00000624349 3251 ntBASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO1Q2MKA7 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 AC093433.1-201ENST00000458048 571 ntBASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 AC026434.2-201ENST00000506094 1078 ntBASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 AC140912.1-201ENST00000577171 1054 ntBASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 AC018665.1-201ENST00000622927 1362 ntBASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 AL136379.1-201ENST00000623471 2642 ntBASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 AP001267.2-201ENST00000532619 2086 ntBASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO1Q2MKA7 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 AC139749.1-202ENST00000617529 3139 ntBASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms