Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.49□□□□□ -0.25
CX3CR1P49238 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.49□□□□□ -0.25
CX3CR1P49238 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.49□□□□□ -0.25
CX3CR1P49238 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.49□□□□□ -0.25
CX3CR1P49238 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CX3CR1P49238 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.49□□□□□ -0.25
CX3CR1P49238 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.49□□□□□ -0.25
CX3CR1P49238 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CX3CR1P49238 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CX3CR1P49238 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CX3CR1P49238 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CX3CR1P49238 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CX3CR1P49238 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CX3CR1P49238 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.49□□□□□ -0.25
CX3CR1P49238 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CX3CR1P49238 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.49□□□□□ -0.25
CX3CR1P49238 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.49□□□□□ -0.25
CX3CR1P49238 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.49□□□□□ -0.25
CX3CR1P49238 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
CX3CR1P49238 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CX3CR1P49238 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CX3CR1P49238 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CX3CR1P49238 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CX3CR1P49238 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.49□□□□□ -0.25
CX3CR1P49238 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CX3CR1P49238 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.48□□□□□ -0.25
CX3CR1P49238 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CX3CR1P49238 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CX3CR1P49238 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CX3CR1P49238 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CX3CR1P49238 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.48□□□□□ -0.25
CX3CR1P49238 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CX3CR1P49238 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CX3CR1P49238 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CX3CR1P49238 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CX3CR1P49238 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.48□□□□□ -0.25
CX3CR1P49238 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CX3CR1P49238 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CX3CR1P49238 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CX3CR1P49238 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CX3CR1P49238 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CX3CR1P49238 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CX3CR1P49238 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CX3CR1P49238 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CX3CR1P49238 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CX3CR1P49238 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CX3CR1P49238 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.48□□□□□ -0.25
CX3CR1P49238 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.48□□□□□ -0.25
CX3CR1P49238 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.48□□□□□ -0.25
CX3CR1P49238 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.48□□□□□ -0.25
CX3CR1P49238 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.48□□□□□ -0.25
CX3CR1P49238 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.48□□□□□ -0.25
CX3CR1P49238 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CX3CR1P49238 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.48□□□□□ -0.25
CX3CR1P49238 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.48□□□□□ -0.25
CX3CR1P49238 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.48□□□□□ -0.25
CX3CR1P49238 AC004461.2-201ENST00000629517 803 ntBASIC13.48□□□□□ -0.25
CX3CR1P49238 AL645728.2-202ENST00000641679 227 ntBASIC13.48□□□□□ -0.25
CX3CR1P49238 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CX3CR1P49238 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CX3CR1P49238 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CX3CR1P49238 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CX3CR1P49238 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CX3CR1P49238 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CX3CR1P49238 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CX3CR1P49238 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CX3CR1P49238 AC012508.2-201ENST00000567613 1472 ntBASIC13.48□□□□□ -0.25
CX3CR1P49238 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CX3CR1P49238 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CX3CR1P49238 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CX3CR1P49238 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CX3CR1P49238 REXO1L2P-201ENST00000425429 2069 ntBASIC13.48□□□□□ -0.25
CX3CR1P49238 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CX3CR1P49238 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.47□□□□□ -0.25
CX3CR1P49238 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CX3CR1P49238 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CX3CR1P49238 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.47□□□□□ -0.25
CX3CR1P49238 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CX3CR1P49238 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.47□□□□□ -0.25
CX3CR1P49238 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CX3CR1P49238 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CX3CR1P49238 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CX3CR1P49238 CICP4-201ENST00000447359 2812 ntBASIC13.47□□□□□ -0.25
CX3CR1P49238 REXO1L4P-201ENST00000605109 1937 ntBASIC13.47□□□□□ -0.25
CX3CR1P49238 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CX3CR1P49238 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CX3CR1P49238 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CX3CR1P49238 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CX3CR1P49238 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CX3CR1P49238 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CX3CR1P49238 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CX3CR1P49238 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CX3CR1P49238 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CX3CR1P49238 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.47□□□□□ -0.25
CX3CR1P49238 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.47□□□□□ -0.25
CX3CR1P49238 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.47□□□□□ -0.25
CX3CR1P49238 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.47□□□□□ -0.25
CX3CR1P49238 METTL21AP1-201ENST00000438852 635 ntBASIC13.47□□□□□ -0.25
CX3CR1P49238 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.47□□□□□ -0.25
CX3CR1P49238 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms