Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
CLCN1P35523 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.46■□□□□ 0.39
CLCN1P35523 AL589702.1-201ENST00000641229 1509 ntBASIC17.46■□□□□ 0.39
CLCN1P35523 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.46■□□□□ 0.39
CLCN1P35523 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CLCN1P35523 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
CLCN1P35523 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC17.45■□□□□ 0.38
CLCN1P35523 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCN1P35523 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC17.45■□□□□ 0.38
CLCN1P35523 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CLCN1P35523 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCN1P35523 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.45■□□□□ 0.38
CLCN1P35523 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCN1P35523 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLCN1P35523 AC127383.1-201ENST00000444697 1800 ntBASIC17.45■□□□□ 0.38
CLCN1P35523 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC17.45■□□□□ 0.38
CLCN1P35523 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCN1P35523 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCN1P35523 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCN1P35523 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
CLCN1P35523 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCN1P35523 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC17.45■□□□□ 0.38
CLCN1P35523 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCN1P35523 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
CLCN1P35523 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLCN1P35523 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CLCN1P35523 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCN1P35523 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCN1P35523 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCN1P35523 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCN1P35523 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLCN1P35523 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCN1P35523 MCCD1P2-201ENST00000423228 335 ntBASIC17.45■□□□□ 0.38
CLCN1P35523 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.45■□□□□ 0.38
CLCN1P35523 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CLCN1P35523 RARRES2P8-201ENST00000566335 367 ntBASIC17.45■□□□□ 0.38
CLCN1P35523 AC002347.1-201ENST00000569543 541 ntBASIC17.45■□□□□ 0.38
CLCN1P35523 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.45■□□□□ 0.38
CLCN1P35523 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLCN1P35523 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
CLCN1P35523 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.45■□□□□ 0.38
CLCN1P35523 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
CLCN1P35523 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCN1P35523 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCN1P35523 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCN1P35523 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CLCN1P35523 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLCN1P35523 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLCN1P35523 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCN1P35523 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.45■□□□□ 0.38
CLCN1P35523 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CLCN1P35523 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC17.44■□□□□ 0.38
CLCN1P35523 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCN1P35523 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCN1P35523 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCN1P35523 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CLCN1P35523 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCN1P35523 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCN1P35523 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
CLCN1P35523 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CLCN1P35523 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
CLCN1P35523 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC17.44■□□□□ 0.38
CLCN1P35523 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC17.44■□□□□ 0.38
CLCN1P35523 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCN1P35523 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCN1P35523 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCN1P35523 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCN1P35523 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCN1P35523 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.44■□□□□ 0.38
CLCN1P35523 AL671277.1-201ENST00000429656 993 ntBASIC17.44■□□□□ 0.38
CLCN1P35523 PRYP6-201ENST00000514804 343 ntBASIC17.44■□□□□ 0.38
CLCN1P35523 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLCN1P35523 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CLCN1P35523 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.44■□□□□ 0.38
CLCN1P35523 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CLCN1P35523 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLCN1P35523 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLCN1P35523 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCN1P35523 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLCN1P35523 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCN1P35523 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCN1P35523 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC17.44■□□□□ 0.38
CLCN1P35523 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.44■□□□□ 0.38
CLCN1P35523 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLCN1P35523 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC17.44■□□□□ 0.38
CLCN1P35523 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.44■□□□□ 0.38
CLCN1P35523 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.44■□□□□ 0.38
CLCN1P35523 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
CLCN1P35523 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.44■□□□□ 0.38
CLCN1P35523 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCN1P35523 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLCN1P35523 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLCN1P35523 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLCN1P35523 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CLCN1P35523 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLCN1P35523 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC17.43■□□□□ 0.38
CLCN1P35523 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CLCN1P35523 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC17.43■□□□□ 0.38
CLCN1P35523 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.43■□□□□ 0.38
CLCN1P35523 FOXO1B-201ENST00000504678 1527 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms