Protein–RNA interactions for Protein: P17482

HOXB9, Homeobox protein Hox-B9, humanhuman

Predicted RBP Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB9P17482 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HOXB9P17482 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXB9P17482 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
HOXB9P17482 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXB9P17482 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXB9P17482 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXB9P17482 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HOXB9P17482 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXB9P17482 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HOXB9P17482 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.34□□□□□ -0.11
HOXB9P17482 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.34□□□□□ -0.11
HOXB9P17482 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.34□□□□□ -0.11
HOXB9P17482 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HOXB9P17482 AC004066.1-201ENST00000502488 802 ntBASIC14.34□□□□□ -0.11
HOXB9P17482 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.34□□□□□ -0.11
HOXB9P17482 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXB9P17482 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXB9P17482 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXB9P17482 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.34□□□□□ -0.11
HOXB9P17482 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
HOXB9P17482 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
HOXB9P17482 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.34□□□□□ -0.11
HOXB9P17482 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.34□□□□□ -0.11
HOXB9P17482 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXB9P17482 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.34□□□□□ -0.11
HOXB9P17482 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXB9P17482 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HOXB9P17482 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXB9P17482 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXB9P17482 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXB9P17482 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HOXB9P17482 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXB9P17482 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXB9P17482 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXB9P17482 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.34□□□□□ -0.11
HOXB9P17482 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HOXB9P17482 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXB9P17482 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXB9P17482 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXB9P17482 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXB9P17482 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXB9P17482 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
HOXB9P17482 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.34□□□□□ -0.11
HOXB9P17482 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.34□□□□□ -0.11
HOXB9P17482 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HOXB9P17482 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.34□□□□□ -0.11
HOXB9P17482 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HOXB9P17482 AC018665.1-201ENST00000622927 1362 ntBASIC14.34□□□□□ -0.11
HOXB9P17482 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HOXB9P17482 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HOXB9P17482 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HOXB9P17482 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.11
HOXB9P17482 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HOXB9P17482 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HOXB9P17482 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.33□□□□□ -0.11
HOXB9P17482 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HOXB9P17482 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
HOXB9P17482 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
HOXB9P17482 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HOXB9P17482 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXB9P17482 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXB9P17482 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXB9P17482 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXB9P17482 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
HOXB9P17482 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXB9P17482 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.33□□□□□ -0.12
HOXB9P17482 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.33□□□□□ -0.12
HOXB9P17482 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
HOXB9P17482 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
HOXB9P17482 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
HOXB9P17482 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.33□□□□□ -0.12
HOXB9P17482 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.33□□□□□ -0.12
HOXB9P17482 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.33□□□□□ -0.12
HOXB9P17482 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.33□□□□□ -0.12
HOXB9P17482 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.33□□□□□ -0.12
HOXB9P17482 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.33□□□□□ -0.12
HOXB9P17482 AL353779.1-201ENST00000434793 351 ntBASIC14.33□□□□□ -0.12
HOXB9P17482 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.33□□□□□ -0.12
HOXB9P17482 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.33□□□□□ -0.12
HOXB9P17482 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.33□□□□□ -0.12
HOXB9P17482 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.33□□□□□ -0.12
HOXB9P17482 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.33□□□□□ -0.12
HOXB9P17482 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.33□□□□□ -0.12
HOXB9P17482 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.33□□□□□ -0.12
HOXB9P17482 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.33□□□□□ -0.12
HOXB9P17482 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.33□□□□□ -0.12
HOXB9P17482 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.33□□□□□ -0.12
HOXB9P17482 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.33□□□□□ -0.12
HOXB9P17482 AC134684.3-201ENST00000641758 218 ntBASIC14.33□□□□□ -0.12
HOXB9P17482 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HOXB9P17482 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXB9P17482 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.33□□□□□ -0.12
HOXB9P17482 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HOXB9P17482 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HOXB9P17482 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.33□□□□□ -0.12
HOXB9P17482 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
HOXB9P17482 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXB9P17482 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.33□□□□□ -0.12
HOXB9P17482 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXB9P17482 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms