Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC22.39■■□□□ 1.17
CDC42BPBQ9Y5S2 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDC42BPBQ9Y5S2 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC22.39■■□□□ 1.17
CDC42BPBQ9Y5S2 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDC42BPBQ9Y5S2 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDC42BPBQ9Y5S2 AL512306.1-201ENST00000432698 848 ntBASIC22.39■■□□□ 1.17
CDC42BPBQ9Y5S2 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC22.39■■□□□ 1.17
CDC42BPBQ9Y5S2 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC22.39■■□□□ 1.17
CDC42BPBQ9Y5S2 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
CDC42BPBQ9Y5S2 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDC42BPBQ9Y5S2 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDC42BPBQ9Y5S2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC22.39■■□□□ 1.17
CDC42BPBQ9Y5S2 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CDC42BPBQ9Y5S2 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CDC42BPBQ9Y5S2 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
CDC42BPBQ9Y5S2 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
CDC42BPBQ9Y5S2 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CDC42BPBQ9Y5S2 KHSRPP1-201ENST00000427983 1768 ntBASIC22.38■■□□□ 1.17
CDC42BPBQ9Y5S2 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC22.38■■□□□ 1.17
CDC42BPBQ9Y5S2 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CDC42BPBQ9Y5S2 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CDC42BPBQ9Y5S2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDC42BPBQ9Y5S2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDC42BPBQ9Y5S2 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDC42BPBQ9Y5S2 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDC42BPBQ9Y5S2 JTB-202ENST00000356648 1040 ntTSL 2 BASIC22.38■■□□□ 1.17
CDC42BPBQ9Y5S2 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDC42BPBQ9Y5S2 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC22.38■■□□□ 1.17
CDC42BPBQ9Y5S2 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CDC42BPBQ9Y5S2 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
CDC42BPBQ9Y5S2 IGHVIII-5-2-201ENST00000522505 261 ntBASIC22.38■■□□□ 1.17
CDC42BPBQ9Y5S2 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC22.38■■□□□ 1.17
CDC42BPBQ9Y5S2 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
CDC42BPBQ9Y5S2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC22.38■■□□□ 1.17
CDC42BPBQ9Y5S2 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC22.38■■□□□ 1.17
CDC42BPBQ9Y5S2 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CDC42BPBQ9Y5S2 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDC42BPBQ9Y5S2 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDC42BPBQ9Y5S2 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDC42BPBQ9Y5S2 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC22.38■■□□□ 1.17
CDC42BPBQ9Y5S2 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDC42BPBQ9Y5S2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CDC42BPBQ9Y5S2 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDC42BPBQ9Y5S2 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CDC42BPBQ9Y5S2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC22.38■■□□□ 1.17
CDC42BPBQ9Y5S2 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC22.37■■□□□ 1.17
CDC42BPBQ9Y5S2 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CDC42BPBQ9Y5S2 RN7SL818P-201ENST00000485099 259 ntBASIC22.37■■□□□ 1.17
CDC42BPBQ9Y5S2 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC22.37■■□□□ 1.17
CDC42BPBQ9Y5S2 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC22.37■■□□□ 1.17
CDC42BPBQ9Y5S2 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC22.37■■□□□ 1.17
CDC42BPBQ9Y5S2 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CDC42BPBQ9Y5S2 RN7SL725P-201ENST00000606439 259 ntBASIC22.37■■□□□ 1.17
CDC42BPBQ9Y5S2 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDC42BPBQ9Y5S2 AP003680.1-201ENST00000598970 3660 ntBASIC22.37■■□□□ 1.17
CDC42BPBQ9Y5S2 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
CDC42BPBQ9Y5S2 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDC42BPBQ9Y5S2 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
CDC42BPBQ9Y5S2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CDC42BPBQ9Y5S2 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDC42BPBQ9Y5S2 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
CDC42BPBQ9Y5S2 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CDC42BPBQ9Y5S2 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC22.37■■□□□ 1.17
CDC42BPBQ9Y5S2 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDC42BPBQ9Y5S2 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
CDC42BPBQ9Y5S2 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDC42BPBQ9Y5S2 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
CDC42BPBQ9Y5S2 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CDC42BPBQ9Y5S2 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC22.37■■□□□ 1.17
CDC42BPBQ9Y5S2 CD164-210ENST00000512821 964 ntTSL 2 BASIC22.37■■□□□ 1.17
CDC42BPBQ9Y5S2 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CDC42BPBQ9Y5S2 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
CDC42BPBQ9Y5S2 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC22.37■■□□□ 1.17
CDC42BPBQ9Y5S2 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC22.37■■□□□ 1.17
CDC42BPBQ9Y5S2 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC22.37■■□□□ 1.17
CDC42BPBQ9Y5S2 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDC42BPBQ9Y5S2 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDC42BPBQ9Y5S2 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC22.36■■□□□ 1.17
CDC42BPBQ9Y5S2 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC22.36■■□□□ 1.17
CDC42BPBQ9Y5S2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC22.36■■□□□ 1.17
CDC42BPBQ9Y5S2 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDC42BPBQ9Y5S2 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDC42BPBQ9Y5S2 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDC42BPBQ9Y5S2 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CDC42BPBQ9Y5S2 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC22.36■■□□□ 1.17
CDC42BPBQ9Y5S2 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC22.36■■□□□ 1.17
CDC42BPBQ9Y5S2 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CDC42BPBQ9Y5S2 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CDC42BPBQ9Y5S2 MARK2P16-201ENST00000605714 1723 ntBASIC22.36■■□□□ 1.17
CDC42BPBQ9Y5S2 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CDC42BPBQ9Y5S2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC22.36■■□□□ 1.17
CDC42BPBQ9Y5S2 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
CDC42BPBQ9Y5S2 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDC42BPBQ9Y5S2 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC22.36■■□□□ 1.17
CDC42BPBQ9Y5S2 AL139008.1-201ENST00000437894 228 ntBASIC22.36■■□□□ 1.17
CDC42BPBQ9Y5S2 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC22.36■■□□□ 1.17
CDC42BPBQ9Y5S2 AC009560.1-201ENST00000620208 434 ntBASIC22.36■■□□□ 1.17
CDC42BPBQ9Y5S2 MVK-217ENST00000639206 367 ntTSL 5 BASIC22.36■■□□□ 1.17
CDC42BPBQ9Y5S2 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDC42BPBQ9Y5S2 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms