Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00346Q8IVM7 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 AC139749.1-202ENST00000617529 3139 ntBASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 AC023908.3-201ENST00000564211 3047 ntBASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 CICP14-201ENST00000629111 2732 ntBASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 SNX18-202ENST00000343017 3140 ntBASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00346Q8IVM7 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LINC00346Q8IVM7 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LINC00346Q8IVM7 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 TSSK5P-201ENST00000423978 907 ntBASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 AL589987.1-201ENST00000453380 819 ntBASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 SPDYE18-201ENST00000510091 1050 ntBASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 AC011467.4-201ENST00000594891 528 ntBASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms