Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 KLF2P2-201ENST00000416807 1039 ntBASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 ENPP7P5-201ENST00000541031 1031 ntBASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 MIR3197-201ENST00000582241 73 ntBASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 CICP14-201ENST00000629111 2732 ntBASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 MSTO2P-201ENST00000314835 1709 ntBASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.05■□□□□ 0.16
PTPN20Q4JDL3 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN20Q4JDL3 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PTPN20Q4JDL3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.04■□□□□ 0.16
PTPN20Q4JDL3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
PTPN20Q4JDL3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN20Q4JDL3 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.04■□□□□ 0.16
PTPN20Q4JDL3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms