Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH15P55291 WASH3P-207ENST00000560956 1394 ntBASIC14.37□□□□□ -0.11
CDH15P55291 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH15P55291 FO538757.1-201ENST00000623083 1397 ntBASIC14.37□□□□□ -0.11
CDH15P55291 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH15P55291 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.37□□□□□ -0.11
CDH15P55291 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH15P55291 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH15P55291 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDH15P55291 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH15P55291 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH15P55291 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CDH15P55291 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH15P55291 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDH15P55291 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDH15P55291 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH15P55291 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CDH15P55291 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CDH15P55291 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CDH15P55291 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CDH15P55291 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
CDH15P55291 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.37□□□□□ -0.11
CDH15P55291 ALG1L5P-201ENST00000482043 771 ntBASIC14.37□□□□□ -0.11
CDH15P55291 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDH15P55291 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.37□□□□□ -0.11
CDH15P55291 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.37□□□□□ -0.11
CDH15P55291 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.37□□□□□ -0.11
CDH15P55291 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.37□□□□□ -0.11
CDH15P55291 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.37□□□□□ -0.11
CDH15P55291 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.37□□□□□ -0.11
CDH15P55291 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.37□□□□□ -0.11
CDH15P55291 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.37□□□□□ -0.11
CDH15P55291 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH15P55291 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDH15P55291 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.37□□□□□ -0.11
CDH15P55291 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH15P55291 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.37□□□□□ -0.11
CDH15P55291 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
CDH15P55291 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDH15P55291 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
CDH15P55291 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
CDH15P55291 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH15P55291 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH15P55291 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH15P55291 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH15P55291 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH15P55291 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.36□□□□□ -0.11
CDH15P55291 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH15P55291 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CDH15P55291 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH15P55291 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH15P55291 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH15P55291 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CDH15P55291 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.36□□□□□ -0.11
CDH15P55291 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CDH15P55291 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.36□□□□□ -0.11
CDH15P55291 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
CDH15P55291 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH15P55291 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.36□□□□□ -0.11
CDH15P55291 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CDH15P55291 SNHG9-202ENST00000564014 471 ntBASIC14.36□□□□□ -0.11
CDH15P55291 MIR4469-201ENST00000583919 79 ntBASIC14.36□□□□□ -0.11
CDH15P55291 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH15P55291 MIR4321-201ENST00000592276 80 ntBASIC14.36□□□□□ -0.11
CDH15P55291 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.36□□□□□ -0.11
CDH15P55291 AL355385.1-201ENST00000606123 409 ntBASIC14.36□□□□□ -0.11
CDH15P55291 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH15P55291 AL596442.2-201ENST00000610240 980 ntBASIC14.36□□□□□ -0.11
CDH15P55291 AL513190.1-201ENST00000621254 727 ntBASIC14.36□□□□□ -0.11
CDH15P55291 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH15P55291 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.36□□□□□ -0.11
CDH15P55291 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
CDH15P55291 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH15P55291 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.36□□□□□ -0.11
CDH15P55291 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH15P55291 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH15P55291 AC067750.1-201ENST00000608826 6545 ntBASIC14.36□□□□□ -0.11
CDH15P55291 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CDH15P55291 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
CDH15P55291 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CDH15P55291 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH15P55291 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CDH15P55291 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH15P55291 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH15P55291 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.36□□□□□ -0.11
CDH15P55291 AC012569.1-201ENST00000591191 1524 ntBASIC14.36□□□□□ -0.11
CDH15P55291 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH15P55291 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH15P55291 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDH15P55291 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDH15P55291 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH15P55291 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CDH15P55291 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDH15P55291 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDH15P55291 CICP11-201ENST00000434745 2827 ntBASIC14.35□□□□□ -0.11
CDH15P55291 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH15P55291 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CDH15P55291 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CDH15P55291 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH15P55291 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms