Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.93□□□□□ -0.34
COL8A2P25067 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.93□□□□□ -0.34
COL8A2P25067 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.93□□□□□ -0.34
COL8A2P25067 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC12.93□□□□□ -0.34
COL8A2P25067 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.93□□□□□ -0.34
COL8A2P25067 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
COL8A2P25067 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.93□□□□□ -0.34
COL8A2P25067 AL583810.1-201ENST00000553344 1045 ntBASIC12.93□□□□□ -0.34
COL8A2P25067 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.93□□□□□ -0.34
COL8A2P25067 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.93□□□□□ -0.34
COL8A2P25067 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.93□□□□□ -0.34
COL8A2P25067 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
COL8A2P25067 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC12.93□□□□□ -0.34
COL8A2P25067 AL033527.4-201ENST00000641026 673 ntBASIC12.93□□□□□ -0.34
COL8A2P25067 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COL8A2P25067 AC148477.4-201ENST00000613430 1793 ntBASIC12.93□□□□□ -0.34
COL8A2P25067 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COL8A2P25067 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COL8A2P25067 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
COL8A2P25067 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
COL8A2P25067 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
COL8A2P25067 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COL8A2P25067 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
COL8A2P25067 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COL8A2P25067 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
COL8A2P25067 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
COL8A2P25067 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
COL8A2P25067 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
COL8A2P25067 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
COL8A2P25067 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC12.92□□□□□ -0.34
COL8A2P25067 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
COL8A2P25067 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
COL8A2P25067 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
COL8A2P25067 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
COL8A2P25067 AL158070.2-201ENST00000623713 1621 ntBASIC12.92□□□□□ -0.34
COL8A2P25067 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
COL8A2P25067 AC090616.6-203ENST00000579186 1945 ntBASIC12.92□□□□□ -0.34
COL8A2P25067 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
COL8A2P25067 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.92□□□□□ -0.34
COL8A2P25067 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
COL8A2P25067 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
COL8A2P25067 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
COL8A2P25067 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
COL8A2P25067 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
COL8A2P25067 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.92□□□□□ -0.34
COL8A2P25067 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
COL8A2P25067 AC026954.1-201ENST00000429771 1293 ntBASIC12.92□□□□□ -0.34
COL8A2P25067 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
COL8A2P25067 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC12.92□□□□□ -0.34
COL8A2P25067 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
COL8A2P25067 FO681548.1-201ENST00000455617 1132 ntBASIC12.92□□□□□ -0.34
COL8A2P25067 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.92□□□□□ -0.34
COL8A2P25067 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.92□□□□□ -0.34
COL8A2P25067 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
COL8A2P25067 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.92□□□□□ -0.34
COL8A2P25067 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.92□□□□□ -0.34
COL8A2P25067 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.92□□□□□ -0.34
COL8A2P25067 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.92□□□□□ -0.34
COL8A2P25067 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.92□□□□□ -0.34
COL8A2P25067 AC132938.4-201ENST00000623835 848 ntBASIC12.92□□□□□ -0.34
COL8A2P25067 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.92□□□□□ -0.34
COL8A2P25067 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.92□□□□□ -0.34
COL8A2P25067 RHOXF1P1-202ENST00000635473 501 ntBASIC12.92□□□□□ -0.34
COL8A2P25067 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
COL8A2P25067 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
COL8A2P25067 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.92□□□□□ -0.34
COL8A2P25067 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
COL8A2P25067 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.92□□□□□ -0.34
COL8A2P25067 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
COL8A2P25067 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
COL8A2P25067 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
COL8A2P25067 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
COL8A2P25067 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
COL8A2P25067 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
COL8A2P25067 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC12.92□□□□□ -0.34
COL8A2P25067 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
COL8A2P25067 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
COL8A2P25067 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A2P25067 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A2P25067 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.91□□□□□ -0.34
COL8A2P25067 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A2P25067 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A2P25067 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
COL8A2P25067 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.91□□□□□ -0.34
COL8A2P25067 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A2P25067 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.91□□□□□ -0.34
COL8A2P25067 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A2P25067 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A2P25067 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A2P25067 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A2P25067 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.91□□□□□ -0.34
COL8A2P25067 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A2P25067 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC12.91□□□□□ -0.34
COL8A2P25067 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.91□□□□□ -0.34
COL8A2P25067 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A2P25067 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
COL8A2P25067 CNN2P8-201ENST00000421872 913 ntBASIC12.91□□□□□ -0.34
COL8A2P25067 FAM197Y7-201ENST00000432892 766 ntBASIC12.91□□□□□ -0.34
COL8A2P25067 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A2P25067 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms