Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 LINC00552-201ENST00000625151 2579 ntBASIC14.27□□□□□ -0.13
HNRNPCL4P0DMR1 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HNRNPCL4P0DMR1 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HNRNPCL4P0DMR1 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
HNRNPCL4P0DMR1 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HNRNPCL4P0DMR1 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HNRNPCL4P0DMR1 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HNRNPCL4P0DMR1 AC100757.3-201ENST00000622361 1406 ntBASIC14.26□□□□□ -0.13
HNRNPCL4P0DMR1 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HNRNPCL4P0DMR1 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HNRNPCL4P0DMR1 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HNRNPCL4P0DMR1 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.26□□□□□ -0.13
HNRNPCL4P0DMR1 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HNRNPCL4P0DMR1 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HNRNPCL4P0DMR1 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HNRNPCL4P0DMR1 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.26□□□□□ -0.13
HNRNPCL4P0DMR1 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
HNRNPCL4P0DMR1 AC114501.2-201ENST00000439631 535 ntBASIC14.26□□□□□ -0.13
HNRNPCL4P0DMR1 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.26□□□□□ -0.13
HNRNPCL4P0DMR1 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.26□□□□□ -0.13
HNRNPCL4P0DMR1 SAMD11P1-201ENST00000571429 661 ntBASIC14.26□□□□□ -0.13
HNRNPCL4P0DMR1 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HNRNPCL4P0DMR1 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.26□□□□□ -0.13
HNRNPCL4P0DMR1 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
HNRNPCL4P0DMR1 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
HNRNPCL4P0DMR1 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HNRNPCL4P0DMR1 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HNRNPCL4P0DMR1 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HNRNPCL4P0DMR1 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HNRNPCL4P0DMR1 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HNRNPCL4P0DMR1 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HNRNPCL4P0DMR1 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HNRNPCL4P0DMR1 AC007787.1-201ENST00000588095 1583 ntBASIC14.26□□□□□ -0.13
HNRNPCL4P0DMR1 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 BTBD7P1-201ENST00000447253 1453 ntBASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 TREML5P-201ENST00000421694 576 ntBASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HNRNPCL4P0DMR1 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.24□□□□□ -0.13
HNRNPCL4P0DMR1 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HNRNPCL4P0DMR1 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HNRNPCL4P0DMR1 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HNRNPCL4P0DMR1 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HNRNPCL4P0DMR1 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HNRNPCL4P0DMR1 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.24□□□□□ -0.13
HNRNPCL4P0DMR1 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HNRNPCL4P0DMR1 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.24□□□□□ -0.13
HNRNPCL4P0DMR1 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HNRNPCL4P0DMR1 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.24□□□□□ -0.13
HNRNPCL4P0DMR1 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
HNRNPCL4P0DMR1 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HNRNPCL4P0DMR1 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HNRNPCL4P0DMR1 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HNRNPCL4P0DMR1 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HNRNPCL4P0DMR1 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HNRNPCL4P0DMR1 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HNRNPCL4P0DMR1 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms