Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.06■□□□□ 0
CPNE6O95741 AC093813.1-201ENST00000605066 256 ntBASIC15.06■□□□□ 0
CPNE6O95741 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.06■□□□□ 0
CPNE6O95741 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.06■□□□□ 0
CPNE6O95741 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE6O95741 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.06■□□□□ 0
CPNE6O95741 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.06■□□□□ 0
CPNE6O95741 AC134312.5-201ENST00000568031 1313 ntBASIC15.06■□□□□ 0
CPNE6O95741 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.06■□□□□ 0
CPNE6O95741 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
CPNE6O95741 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE6O95741 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
CPNE6O95741 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE6O95741 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE6O95741 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE6O95741 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.06■□□□□ 0
CPNE6O95741 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.06■□□□□ 0
CPNE6O95741 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.06■□□□□ 0
CPNE6O95741 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE6O95741 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.06■□□□□ 0
CPNE6O95741 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.06■□□□□ 0
CPNE6O95741 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE6O95741 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CPNE6O95741 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CPNE6O95741 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.05■□□□□ 0
CPNE6O95741 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
CPNE6O95741 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.05■□□□□ 0
CPNE6O95741 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.05■□□□□ 0
CPNE6O95741 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CPNE6O95741 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CPNE6O95741 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.05■□□□□ 0
CPNE6O95741 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
CPNE6O95741 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
CPNE6O95741 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
CPNE6O95741 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
CPNE6O95741 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.05■□□□□ 0
CPNE6O95741 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
CPNE6O95741 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
CPNE6O95741 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CPNE6O95741 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE6O95741 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.05■□□□□ -0
CPNE6O95741 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.05■□□□□ -0
CPNE6O95741 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.05■□□□□ -0
CPNE6O95741 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.05■□□□□ -0
CPNE6O95741 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.05■□□□□ -0
CPNE6O95741 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.05■□□□□ -0
CPNE6O95741 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.05■□□□□ -0
CPNE6O95741 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.05■□□□□ -0
CPNE6O95741 RPL7P3-201ENST00000441388 714 ntBASIC15.05■□□□□ -0
CPNE6O95741 FO681548.1-201ENST00000455617 1132 ntBASIC15.05■□□□□ -0
CPNE6O95741 AC022494.1-201ENST00000466044 728 ntBASIC15.05■□□□□ -0
CPNE6O95741 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.05■□□□□ -0
CPNE6O95741 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
CPNE6O95741 AC026410.3-201ENST00000514280 936 ntBASIC15.05■□□□□ -0
CPNE6O95741 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.05■□□□□ -0
CPNE6O95741 AC005252.2-201ENST00000624630 1141 ntBASIC15.05■□□□□ -0
CPNE6O95741 AC093525.8-201ENST00000624099 1342 ntBASIC15.05■□□□□ -0
CPNE6O95741 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE6O95741 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.05■□□□□ -0
CPNE6O95741 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE6O95741 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.05■□□□□ -0
CPNE6O95741 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE6O95741 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.05■□□□□ -0
CPNE6O95741 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.05■□□□□ -0
CPNE6O95741 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.05■□□□□ -0
CPNE6O95741 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE6O95741 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.05■□□□□ -0
CPNE6O95741 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
CPNE6O95741 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ -0
CPNE6O95741 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.05■□□□□ -0
CPNE6O95741 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.05■□□□□ -0
CPNE6O95741 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE6O95741 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE6O95741 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.05■□□□□ -0
CPNE6O95741 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.05■□□□□ -0
CPNE6O95741 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE6O95741 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE6O95741 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE6O95741 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CPNE6O95741 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.04■□□□□ -0
CPNE6O95741 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.04■□□□□ -0
CPNE6O95741 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE6O95741 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE6O95741 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE6O95741 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.04■□□□□ -0
CPNE6O95741 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.04■□□□□ -0
CPNE6O95741 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE6O95741 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE6O95741 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE6O95741 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE6O95741 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE6O95741 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.04■□□□□ -0
CPNE6O95741 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.04■□□□□ -0
CPNE6O95741 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CPNE6O95741 REXO1L6P-201ENST00000603433 1515 ntBASIC15.04■□□□□ -0
CPNE6O95741 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE6O95741 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.04■□□□□ -0
CPNE6O95741 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE6O95741 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.04■□□□□ -0
CPNE6O95741 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms