Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLIC4Q9Y696 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLIC4Q9Y696 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLIC4Q9Y696 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLIC4Q9Y696 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLIC4Q9Y696 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLIC4Q9Y696 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLIC4Q9Y696 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLIC4Q9Y696 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLIC4Q9Y696 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CLIC4Q9Y696 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CLIC4Q9Y696 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLIC4Q9Y696 HLA-K-203ENST00000430151 1046 ntBASIC17.46■□□□□ 0.39
CLIC4Q9Y696 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLIC4Q9Y696 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC17.46■□□□□ 0.39
CLIC4Q9Y696 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.46■□□□□ 0.39
CLIC4Q9Y696 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.46■□□□□ 0.39
CLIC4Q9Y696 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.46■□□□□ 0.39
CLIC4Q9Y696 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
CLIC4Q9Y696 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.46■□□□□ 0.39
CLIC4Q9Y696 RARRES2P5-201ENST00000564013 466 ntBASIC17.46■□□□□ 0.39
CLIC4Q9Y696 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLIC4Q9Y696 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.46■□□□□ 0.39
CLIC4Q9Y696 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.46■□□□□ 0.39
CLIC4Q9Y696 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CLIC4Q9Y696 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLIC4Q9Y696 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC17.46■□□□□ 0.39
CLIC4Q9Y696 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLIC4Q9Y696 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLIC4Q9Y696 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLIC4Q9Y696 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLIC4Q9Y696 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLIC4Q9Y696 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLIC4Q9Y696 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLIC4Q9Y696 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.45■□□□□ 0.38
CLIC4Q9Y696 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLIC4Q9Y696 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLIC4Q9Y696 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.45■□□□□ 0.38
CLIC4Q9Y696 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLIC4Q9Y696 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CLIC4Q9Y696 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CLIC4Q9Y696 AP001267.2-201ENST00000532619 2086 ntBASIC17.45■□□□□ 0.38
CLIC4Q9Y696 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLIC4Q9Y696 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLIC4Q9Y696 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLIC4Q9Y696 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CLIC4Q9Y696 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLIC4Q9Y696 GNAQP1-201ENST00000444815 1067 ntBASIC17.45■□□□□ 0.38
CLIC4Q9Y696 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.45■□□□□ 0.38
CLIC4Q9Y696 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLIC4Q9Y696 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
CLIC4Q9Y696 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CLIC4Q9Y696 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.45■□□□□ 0.38
CLIC4Q9Y696 AC107373.2-201ENST00000607735 490 ntBASIC17.45■□□□□ 0.38
CLIC4Q9Y696 AC006538.3-201ENST00000612495 578 ntBASIC17.45■□□□□ 0.38
CLIC4Q9Y696 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.45■□□□□ 0.38
CLIC4Q9Y696 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC17.45■□□□□ 0.38
CLIC4Q9Y696 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLIC4Q9Y696 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLIC4Q9Y696 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLIC4Q9Y696 AC093525.8-201ENST00000624099 1342 ntBASIC17.45■□□□□ 0.38
CLIC4Q9Y696 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLIC4Q9Y696 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.45■□□□□ 0.38
CLIC4Q9Y696 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLIC4Q9Y696 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLIC4Q9Y696 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLIC4Q9Y696 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLIC4Q9Y696 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLIC4Q9Y696 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLIC4Q9Y696 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLIC4Q9Y696 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.44■□□□□ 0.38
CLIC4Q9Y696 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.44■□□□□ 0.38
CLIC4Q9Y696 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLIC4Q9Y696 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLIC4Q9Y696 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLIC4Q9Y696 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.44■□□□□ 0.38
CLIC4Q9Y696 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.44■□□□□ 0.38
CLIC4Q9Y696 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLIC4Q9Y696 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.44■□□□□ 0.38
CLIC4Q9Y696 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.44■□□□□ 0.38
CLIC4Q9Y696 RN7SL399P-201ENST00000471648 279 ntBASIC17.44■□□□□ 0.38
CLIC4Q9Y696 AC026410.3-201ENST00000514280 936 ntBASIC17.44■□□□□ 0.38
CLIC4Q9Y696 DOC2GP-202ENST00000514950 1163 ntBASIC17.44■□□□□ 0.38
CLIC4Q9Y696 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.44■□□□□ 0.38
CLIC4Q9Y696 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms