Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 AC008805.1-201ENST00000590892 364 ntBASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 CLUHP2-201ENST00000426660 1303 ntBASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 AL135901.1-201ENST00000451812 333 ntBASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 AC004554.1-201ENST00000422830 1468 ntBASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 AC084781.1-201ENST00000613737 656 ntBASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSMD1Q96PZ7 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 FAM90A7P-201ENST00000382628 1395 ntBASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 FAM90A23P-201ENST00000400136 1395 ntBASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 ELP5-212ENST00000574255 671 ntTSL 2 BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 AC090510.3-201ENST00000615831 821 ntBASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 AL136295.7-201ENST00000619226 1200 ntBASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 AC011840.2-201ENST00000563063 1520 ntBASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms