Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC83Q8IWF9 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC83Q8IWF9 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC83Q8IWF9 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC83Q8IWF9 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC83Q8IWF9 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC83Q8IWF9 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC83Q8IWF9 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC83Q8IWF9 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC83Q8IWF9 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC83Q8IWF9 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC83Q8IWF9 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC83Q8IWF9 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC83Q8IWF9 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CCDC83Q8IWF9 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC83Q8IWF9 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC83Q8IWF9 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.02■□□□□ 0.48
CCDC83Q8IWF9 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC83Q8IWF9 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC83Q8IWF9 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.02■□□□□ 0.48
CCDC83Q8IWF9 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC83Q8IWF9 AC009477.1-201ENST00000452936 217 ntBASIC18.02■□□□□ 0.48
CCDC83Q8IWF9 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC83Q8IWF9 AC092337.1-201ENST00000568699 1129 ntBASIC18.02■□□□□ 0.48
CCDC83Q8IWF9 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
CCDC83Q8IWF9 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC83Q8IWF9 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC83Q8IWF9 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
CCDC83Q8IWF9 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
CCDC83Q8IWF9 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
CCDC83Q8IWF9 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC83Q8IWF9 MYO15B-237ENST00000642007 4893 ntBASIC18.02■□□□□ 0.47
CCDC83Q8IWF9 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC83Q8IWF9 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC83Q8IWF9 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC83Q8IWF9 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC83Q8IWF9 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC18.02■□□□□ 0.47
CCDC83Q8IWF9 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC83Q8IWF9 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
CCDC83Q8IWF9 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC18.02■□□□□ 0.47
CCDC83Q8IWF9 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
CCDC83Q8IWF9 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC83Q8IWF9 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 AC117489.1-201ENST00000625169 3217 ntBASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 UCKL1-AS1-201ENST00000623569 3602 ntBASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 AC241585.1-201ENST00000433527 519 ntBASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 SAMD11P1-201ENST00000571429 661 ntBASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 AL390754.1-201ENST00000619088 582 ntBASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 AC004840.1-201ENST00000636359 365 ntBASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 CLK3P2-201ENST00000427566 1453 ntBASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC83Q8IWF9 AL157414.3-201ENST00000624276 1954 ntBASIC18■□□□□ 0.47
CCDC83Q8IWF9 KRT18P28-201ENST00000453838 1332 ntBASIC18■□□□□ 0.47
CCDC83Q8IWF9 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18■□□□□ 0.47
CCDC83Q8IWF9 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18■□□□□ 0.47
CCDC83Q8IWF9 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
CCDC83Q8IWF9 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC83Q8IWF9 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CCDC83Q8IWF9 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC83Q8IWF9 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18■□□□□ 0.47
CCDC83Q8IWF9 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC83Q8IWF9 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC18■□□□□ 0.47
CCDC83Q8IWF9 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18■□□□□ 0.47
CCDC83Q8IWF9 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC83Q8IWF9 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC18■□□□□ 0.47
CCDC83Q8IWF9 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CCDC83Q8IWF9 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC83Q8IWF9 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC83Q8IWF9 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms