Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
CDH13P55290 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH13P55290 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH13P55290 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.04■□□□□ -0
CDH13P55290 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
CDH13P55290 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.04■□□□□ -0
CDH13P55290 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CDH13P55290 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH13P55290 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
CDH13P55290 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH13P55290 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CDH13P55290 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH13P55290 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CDH13P55290 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH13P55290 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.04■□□□□ -0
CDH13P55290 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.04■□□□□ -0
CDH13P55290 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.04■□□□□ -0
CDH13P55290 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH13P55290 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CDH13P55290 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
CDH13P55290 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH13P55290 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.03■□□□□ -0
CDH13P55290 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDH13P55290 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH13P55290 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH13P55290 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH13P55290 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.03■□□□□ -0
CDH13P55290 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CDH13P55290 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH13P55290 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH13P55290 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDH13P55290 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH13P55290 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.03■□□□□ -0
CDH13P55290 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH13P55290 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH13P55290 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH13P55290 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CDH13P55290 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDH13P55290 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.03■□□□□ -0
CDH13P55290 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.03■□□□□ -0
CDH13P55290 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.03■□□□□ -0
CDH13P55290 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CDH13P55290 AC073592.8-201ENST00000624126 511 ntBASIC15.03■□□□□ -0
CDH13P55290 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH13P55290 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.03■□□□□ -0
CDH13P55290 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CDH13P55290 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CDH13P55290 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CDH13P55290 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.03■□□□□ -0
CDH13P55290 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.03■□□□□ -0
CDH13P55290 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDH13P55290 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
CDH13P55290 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH13P55290 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CDH13P55290 AC012508.2-201ENST00000567613 1472 ntBASIC15.02■□□□□ -0
CDH13P55290 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH13P55290 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH13P55290 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.02■□□□□ -0
CDH13P55290 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH13P55290 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CDH13P55290 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDH13P55290 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.02■□□□□ -0
CDH13P55290 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH13P55290 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH13P55290 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CDH13P55290 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH13P55290 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH13P55290 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH13P55290 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CDH13P55290 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CDH13P55290 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.02■□□□□ -0
CDH13P55290 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.02■□□□□ -0
CDH13P55290 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.02■□□□□ -0
CDH13P55290 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.02■□□□□ -0
CDH13P55290 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.02■□□□□ -0
CDH13P55290 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH13P55290 KRT18P43-201ENST00000469825 1281 ntBASIC15.02■□□□□ -0
CDH13P55290 AC125807.1-201ENST00000483097 614 ntBASIC15.02■□□□□ -0
CDH13P55290 AC027369.6-201ENST00000525520 931 ntBASIC15.02■□□□□ -0
CDH13P55290 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.02■□□□□ -0
CDH13P55290 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.02■□□□□ -0
CDH13P55290 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CDH13P55290 AC044860.1-202ENST00000559481 777 ntBASIC15.02■□□□□ -0
CDH13P55290 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.02■□□□□ -0
CDH13P55290 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDH13P55290 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CDH13P55290 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.02□□□□□ -0.01
CDH13P55290 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CDH13P55290 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
CDH13P55290 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
CDH13P55290 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CDH13P55290 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.02□□□□□ -0.01
CDH13P55290 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CDH13P55290 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH13P55290 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.01□□□□□ -0.01
CDH13P55290 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH13P55290 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH13P55290 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CDH13P55290 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH13P55290 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms