Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
RETP07949 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
RETP07949 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.45■□□□□ 0.06
RETP07949 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.45■□□□□ 0.06
RETP07949 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC15.45■□□□□ 0.06
RETP07949 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 HNRNPUP1-201ENST00000554987 333 ntBASIC15.45■□□□□ 0.06
RETP07949 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC15.45■□□□□ 0.06
RETP07949 AC107373.2-201ENST00000607735 490 ntBASIC15.45■□□□□ 0.06
RETP07949 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 AP001505.2-201ENST00000616815 443 ntBASIC15.45■□□□□ 0.06
RETP07949 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC15.45■□□□□ 0.06
RETP07949 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RETP07949 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.45■□□□□ 0.06
RETP07949 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.45■□□□□ 0.06
RETP07949 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.45■□□□□ 0.06
RETP07949 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.45■□□□□ 0.06
RETP07949 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.45■□□□□ 0.06
RETP07949 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RETP07949 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.45■□□□□ 0.06
RETP07949 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.45■□□□□ 0.06
RETP07949 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.45■□□□□ 0.06
RETP07949 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RETP07949 KRT8P35-201ENST00000483942 1338 ntBASIC15.44■□□□□ 0.06
RETP07949 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RETP07949 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RETP07949 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.44■□□□□ 0.06
RETP07949 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RETP07949 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RETP07949 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RETP07949 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RETP07949 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RETP07949 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RETP07949 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
RETP07949 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RETP07949 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RETP07949 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.44■□□□□ 0.06
RETP07949 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
RETP07949 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.44■□□□□ 0.06
RETP07949 AL008707.1-201ENST00000422498 534 ntBASIC15.44■□□□□ 0.06
RETP07949 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.44■□□□□ 0.06
RETP07949 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.44■□□□□ 0.06
RETP07949 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
RETP07949 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RETP07949 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC15.44■□□□□ 0.06
RETP07949 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RETP07949 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.44■□□□□ 0.06
RETP07949 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.44■□□□□ 0.06
RETP07949 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RETP07949 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.44■□□□□ 0.06
RETP07949 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RETP07949 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RETP07949 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RETP07949 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
RETP07949 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.44■□□□□ 0.06
RETP07949 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
RETP07949 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
RETP07949 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
RETP07949 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RETP07949 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RETP07949 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
RETP07949 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RETP07949 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.43■□□□□ 0.06
RETP07949 PPT1-215ENST00000641471 2368 ntBASIC15.43■□□□□ 0.06
RETP07949 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RETP07949 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.43■□□□□ 0.06
RETP07949 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RETP07949 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RETP07949 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RETP07949 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RETP07949 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RETP07949 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RETP07949 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
RETP07949 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RETP07949 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RETP07949 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RETP07949 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RETP07949 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.43■□□□□ 0.06
RETP07949 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RETP07949 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.43■□□□□ 0.06
RETP07949 AC016700.1-201ENST00000429424 312 ntBASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms