Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CDC7O00311 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CDC7O00311 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.06■□□□□ 0
CDC7O00311 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CDC7O00311 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.06■□□□□ 0
CDC7O00311 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDC7O00311 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CDC7O00311 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CDC7O00311 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDC7O00311 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDC7O00311 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CDC7O00311 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
CDC7O00311 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDC7O00311 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
CDC7O00311 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDC7O00311 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDC7O00311 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDC7O00311 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CDC7O00311 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDC7O00311 AC007292.2-201ENST00000593524 1812 ntBASIC15.06■□□□□ 0
CDC7O00311 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.06■□□□□ 0
CDC7O00311 AC232323.1-201ENST00000540724 2099 ntBASIC15.05■□□□□ 0
CDC7O00311 REXO1L5P-201ENST00000622260 2098 ntBASIC15.05■□□□□ 0
CDC7O00311 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
CDC7O00311 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CDC7O00311 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CDC7O00311 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CDC7O00311 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
CDC7O00311 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
CDC7O00311 AL009178.2-201ENST00000597278 2719 ntBASIC15.05■□□□□ 0
CDC7O00311 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.05■□□□□ 0
CDC7O00311 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CDC7O00311 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDC7O00311 PMS2P2-201ENST00000425039 1128 ntBASIC15.05■□□□□ -0
CDC7O00311 FAM86LP-201ENST00000478302 853 ntBASIC15.05■□□□□ -0
CDC7O00311 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.05■□□□□ -0
CDC7O00311 DOC2GP-202ENST00000514950 1163 ntBASIC15.05■□□□□ -0
CDC7O00311 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.05■□□□□ -0
CDC7O00311 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.05■□□□□ -0
CDC7O00311 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.05■□□□□ -0
CDC7O00311 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
CDC7O00311 RARRES2P5-201ENST00000564013 466 ntBASIC15.05■□□□□ -0
CDC7O00311 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDC7O00311 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDC7O00311 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.05■□□□□ -0
CDC7O00311 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDC7O00311 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
CDC7O00311 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDC7O00311 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDC7O00311 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.05■□□□□ -0
CDC7O00311 AL157414.3-201ENST00000624276 1954 ntBASIC15.05■□□□□ -0
CDC7O00311 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.05■□□□□ -0
CDC7O00311 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDC7O00311 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.05■□□□□ -0
CDC7O00311 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDC7O00311 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CDC7O00311 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CDC7O00311 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDC7O00311 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDC7O00311 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.04■□□□□ -0
CDC7O00311 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDC7O00311 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.04■□□□□ -0
CDC7O00311 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
CDC7O00311 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.04■□□□□ -0
CDC7O00311 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
CDC7O00311 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDC7O00311 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDC7O00311 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDC7O00311 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDC7O00311 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CDC7O00311 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.04■□□□□ -0
CDC7O00311 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDC7O00311 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDC7O00311 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CDC7O00311 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDC7O00311 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CDC7O00311 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDC7O00311 SPDYE19P-201ENST00000338590 713 ntBASIC15.04■□□□□ -0
CDC7O00311 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDC7O00311 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CDC7O00311 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.04■□□□□ -0
CDC7O00311 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.04■□□□□ -0
CDC7O00311 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDC7O00311 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CDC7O00311 GNAQP1-201ENST00000444815 1067 ntBASIC15.04■□□□□ -0
CDC7O00311 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.04■□□□□ -0
CDC7O00311 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDC7O00311 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
CDC7O00311 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.04■□□□□ -0
CDC7O00311 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.04■□□□□ -0
CDC7O00311 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.04■□□□□ -0
CDC7O00311 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.04■□□□□ -0
CDC7O00311 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.04■□□□□ -0
CDC7O00311 TPRX2P-201ENST00000535362 881 ntBASIC15.04■□□□□ -0
CDC7O00311 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDC7O00311 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.04■□□□□ -0
CDC7O00311 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CDC7O00311 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.04■□□□□ -0
CDC7O00311 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDC7O00311 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms