Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.82■■□□□ 1.08
PCDHGB3Q9Y5G1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.82■■□□□ 1.08
PCDHGB3Q9Y5G1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDHGB3Q9Y5G1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
PCDHGB3Q9Y5G1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGB3Q9Y5G1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGB3Q9Y5G1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHGB3Q9Y5G1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGB3Q9Y5G1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGB3Q9Y5G1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGB3Q9Y5G1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHGB3Q9Y5G1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
PCDHGB3Q9Y5G1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.81■■□□□ 1.08
PCDHGB3Q9Y5G1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGB3Q9Y5G1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDHGB3Q9Y5G1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGB3Q9Y5G1 AC019171.1-201ENST00000601251 1056 ntBASIC21.8■■□□□ 1.08
PCDHGB3Q9Y5G1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PCDHGB3Q9Y5G1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDHGB3Q9Y5G1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDHGB3Q9Y5G1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGB3Q9Y5G1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGB3Q9Y5G1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGB3Q9Y5G1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGB3Q9Y5G1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGB3Q9Y5G1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGB3Q9Y5G1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGB3Q9Y5G1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHGB3Q9Y5G1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGB3Q9Y5G1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGB3Q9Y5G1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGB3Q9Y5G1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGB3Q9Y5G1 AC068473.5-201ENST00000616428 2072 ntBASIC21.78■■□□□ 1.08
PCDHGB3Q9Y5G1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGB3Q9Y5G1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PCDHGB3Q9Y5G1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGB3Q9Y5G1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHGB3Q9Y5G1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGB3Q9Y5G1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.77■■□□□ 1.08
PCDHGB3Q9Y5G1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGB3Q9Y5G1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGB3Q9Y5G1 AL592295.1-201ENST00000400984 884 ntBASIC21.77■■□□□ 1.08
PCDHGB3Q9Y5G1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGB3Q9Y5G1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHGB3Q9Y5G1 AC010980.1-201ENST00000587192 1142 ntBASIC21.77■■□□□ 1.08
PCDHGB3Q9Y5G1 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGB3Q9Y5G1 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGB3Q9Y5G1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGB3Q9Y5G1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGB3Q9Y5G1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.77■■□□□ 1.07
PCDHGB3Q9Y5G1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCDHGB3Q9Y5G1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGB3Q9Y5G1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGB3Q9Y5G1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGB3Q9Y5G1 MIR4508-201ENST00000584178 70 ntBASIC21.76■■□□□ 1.07
PCDHGB3Q9Y5G1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.76■■□□□ 1.07
PCDHGB3Q9Y5G1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHGB3Q9Y5G1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
PCDHGB3Q9Y5G1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGB3Q9Y5G1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGB3Q9Y5G1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGB3Q9Y5G1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGB3Q9Y5G1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGB3Q9Y5G1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGB3Q9Y5G1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGB3Q9Y5G1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGB3Q9Y5G1 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGB3Q9Y5G1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGB3Q9Y5G1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGB3Q9Y5G1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHGB3Q9Y5G1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGB3Q9Y5G1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
PCDHGB3Q9Y5G1 YBX1P4-201ENST00000392794 808 ntBASIC21.74■■□□□ 1.07
PCDHGB3Q9Y5G1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGB3Q9Y5G1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.74■■□□□ 1.07
PCDHGB3Q9Y5G1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.74■■□□□ 1.07
PCDHGB3Q9Y5G1 AC004812.2-201ENST00000611079 2094 ntBASIC21.74■■□□□ 1.07
PCDHGB3Q9Y5G1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.74■■□□□ 1.07
PCDHGB3Q9Y5G1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGB3Q9Y5G1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGB3Q9Y5G1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGB3Q9Y5G1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGB3Q9Y5G1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGB3Q9Y5G1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.73■■□□□ 1.07
PCDHGB3Q9Y5G1 LONRF2P2-201ENST00000439212 571 ntBASIC21.73■■□□□ 1.07
PCDHGB3Q9Y5G1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGB3Q9Y5G1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGB3Q9Y5G1 DUSP8P5-201ENST00000422884 1815 ntBASIC21.73■■□□□ 1.07
PCDHGB3Q9Y5G1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
PCDHGB3Q9Y5G1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDHGB3Q9Y5G1 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
PCDHGB3Q9Y5G1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGB3Q9Y5G1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDHGB3Q9Y5G1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
PCDHGB3Q9Y5G1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.71■■□□□ 1.07
PCDHGB3Q9Y5G1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
PCDHGB3Q9Y5G1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
PCDHGB3Q9Y5G1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGB3Q9Y5G1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.71■■□□□ 1.07
PCDHGB3Q9Y5G1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms