Protein–RNA interactions for Protein: Q9NZP6

NPAP1, Nuclear pore-associated protein 1, humanhuman

Predictions only

Length 1,156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1Q9NZP6 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPAP1Q9NZP6 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NPAP1Q9NZP6 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
NPAP1Q9NZP6 YBX1P4-201ENST00000392794 808 ntBASIC20.86■□□□□ 0.93
NPAP1Q9NZP6 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
NPAP1Q9NZP6 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NPAP1Q9NZP6 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPAP1Q9NZP6 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.86■□□□□ 0.93
NPAP1Q9NZP6 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NPAP1Q9NZP6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPAP1Q9NZP6 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAP1Q9NZP6 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.85■□□□□ 0.93
NPAP1Q9NZP6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.85■□□□□ 0.93
NPAP1Q9NZP6 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAP1Q9NZP6 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NPAP1Q9NZP6 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAP1Q9NZP6 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAP1Q9NZP6 AC019171.1-201ENST00000601251 1056 ntBASIC20.85■□□□□ 0.93
NPAP1Q9NZP6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAP1Q9NZP6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAP1Q9NZP6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAP1Q9NZP6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.85■□□□□ 0.93
NPAP1Q9NZP6 AL117328.2-201ENST00000624617 1940 ntBASIC20.84■□□□□ 0.93
NPAP1Q9NZP6 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.84■□□□□ 0.93
NPAP1Q9NZP6 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.84■□□□□ 0.93
NPAP1Q9NZP6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPAP1Q9NZP6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NPAP1Q9NZP6 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
NPAP1Q9NZP6 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPAP1Q9NZP6 AC010501.1-201ENST00000606270 1962 ntBASIC20.84■□□□□ 0.93
NPAP1Q9NZP6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.84■□□□□ 0.93
NPAP1Q9NZP6 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPAP1Q9NZP6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NPAP1Q9NZP6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NPAP1Q9NZP6 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
NPAP1Q9NZP6 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NPAP1Q9NZP6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
NPAP1Q9NZP6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NPAP1Q9NZP6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NPAP1Q9NZP6 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
NPAP1Q9NZP6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NPAP1Q9NZP6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NPAP1Q9NZP6 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NPAP1Q9NZP6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NPAP1Q9NZP6 KRT18P10-201ENST00000388836 1287 ntBASIC20.83■□□□□ 0.93
NPAP1Q9NZP6 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.83■□□□□ 0.93
NPAP1Q9NZP6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NPAP1Q9NZP6 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NPAP1Q9NZP6 LINC01124-201ENST00000409786 2117 ntBASIC20.83■□□□□ 0.92
NPAP1Q9NZP6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
NPAP1Q9NZP6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NPAP1Q9NZP6 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NPAP1Q9NZP6 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPAP1Q9NZP6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPAP1Q9NZP6 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
NPAP1Q9NZP6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NPAP1Q9NZP6 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.82■□□□□ 0.92
NPAP1Q9NZP6 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPAP1Q9NZP6 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.82■□□□□ 0.92
NPAP1Q9NZP6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.82■□□□□ 0.92
NPAP1Q9NZP6 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPAP1Q9NZP6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPAP1Q9NZP6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPAP1Q9NZP6 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
NPAP1Q9NZP6 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
NPAP1Q9NZP6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.81■□□□□ 0.92
NPAP1Q9NZP6 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPAP1Q9NZP6 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NPAP1Q9NZP6 AL035685.1-201ENST00000636663 812 ntBASIC20.81■□□□□ 0.92
NPAP1Q9NZP6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPAP1Q9NZP6 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NPAP1Q9NZP6 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NPAP1Q9NZP6 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.8■□□□□ 0.92
NPAP1Q9NZP6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPAP1Q9NZP6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPAP1Q9NZP6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
NPAP1Q9NZP6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NPAP1Q9NZP6 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
NPAP1Q9NZP6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NPAP1Q9NZP6 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NPAP1Q9NZP6 AC103724.3-201ENST00000564481 992 ntBASIC20.8■□□□□ 0.92
NPAP1Q9NZP6 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.8■□□□□ 0.92
NPAP1Q9NZP6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPAP1Q9NZP6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.8■□□□□ 0.92
NPAP1Q9NZP6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPAP1Q9NZP6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPAP1Q9NZP6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NPAP1Q9NZP6 AC096887.2-201ENST00000623443 1957 ntBASIC20.79■□□□□ 0.92
NPAP1Q9NZP6 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPAP1Q9NZP6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NPAP1Q9NZP6 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
NPAP1Q9NZP6 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPAP1Q9NZP6 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPAP1Q9NZP6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NPAP1Q9NZP6 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.79■□□□□ 0.92
NPAP1Q9NZP6 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPAP1Q9NZP6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NPAP1Q9NZP6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPAP1Q9NZP6 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPAP1Q9NZP6 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms