Protein–RNA interactions for Protein: Q9H7J1

PPP1R3E, Protein phosphatase 1 regulatory subunit 3E, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3EQ9H7J1 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PPP1R3EQ9H7J1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.43■□□□□ 0.86
PPP1R3EQ9H7J1 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PPP1R3EQ9H7J1 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
PPP1R3EQ9H7J1 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPP1R3EQ9H7J1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PPP1R3EQ9H7J1 EP400NL-214ENST00000641289 2402 ntBASIC20.42■□□□□ 0.86
PPP1R3EQ9H7J1 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPP1R3EQ9H7J1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.42■□□□□ 0.86
PPP1R3EQ9H7J1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PPP1R3EQ9H7J1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.42■□□□□ 0.86
PPP1R3EQ9H7J1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.42■□□□□ 0.86
PPP1R3EQ9H7J1 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
PPP1R3EQ9H7J1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.41■□□□□ 0.86
PPP1R3EQ9H7J1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.41■□□□□ 0.86
PPP1R3EQ9H7J1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PPP1R3EQ9H7J1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PPP1R3EQ9H7J1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PPP1R3EQ9H7J1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PPP1R3EQ9H7J1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PPP1R3EQ9H7J1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.41■□□□□ 0.86
PPP1R3EQ9H7J1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.41■□□□□ 0.86
PPP1R3EQ9H7J1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PPP1R3EQ9H7J1 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
PPP1R3EQ9H7J1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PPP1R3EQ9H7J1 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PPP1R3EQ9H7J1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.4■□□□□ 0.86
PPP1R3EQ9H7J1 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PPP1R3EQ9H7J1 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PPP1R3EQ9H7J1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.4■□□□□ 0.86
PPP1R3EQ9H7J1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PPP1R3EQ9H7J1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
PPP1R3EQ9H7J1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.39■□□□□ 0.86
PPP1R3EQ9H7J1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PPP1R3EQ9H7J1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PPP1R3EQ9H7J1 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PPP1R3EQ9H7J1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PPP1R3EQ9H7J1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PPP1R3EQ9H7J1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PPP1R3EQ9H7J1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PPP1R3EQ9H7J1 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PPP1R3EQ9H7J1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
PPP1R3EQ9H7J1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PPP1R3EQ9H7J1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PPP1R3EQ9H7J1 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PPP1R3EQ9H7J1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PPP1R3EQ9H7J1 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PPP1R3EQ9H7J1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PPP1R3EQ9H7J1 AL592293.1-201ENST00000502889 1188 ntBASIC20.38■□□□□ 0.85
PPP1R3EQ9H7J1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.38■□□□□ 0.85
PPP1R3EQ9H7J1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.38■□□□□ 0.85
PPP1R3EQ9H7J1 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PPP1R3EQ9H7J1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PPP1R3EQ9H7J1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PPP1R3EQ9H7J1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.37■□□□□ 0.85
PPP1R3EQ9H7J1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PPP1R3EQ9H7J1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PPP1R3EQ9H7J1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PPP1R3EQ9H7J1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PPP1R3EQ9H7J1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PPP1R3EQ9H7J1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PPP1R3EQ9H7J1 SPCS2P3-201ENST00000500401 656 ntBASIC20.37■□□□□ 0.85
PPP1R3EQ9H7J1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PPP1R3EQ9H7J1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PPP1R3EQ9H7J1 AC233723.2-201ENST00000623798 2106 ntBASIC20.36■□□□□ 0.85
PPP1R3EQ9H7J1 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PPP1R3EQ9H7J1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.36■□□□□ 0.85
PPP1R3EQ9H7J1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PPP1R3EQ9H7J1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
PPP1R3EQ9H7J1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PPP1R3EQ9H7J1 U85056.1-201ENST00000616429 682 ntBASIC20.36■□□□□ 0.85
PPP1R3EQ9H7J1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PPP1R3EQ9H7J1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PPP1R3EQ9H7J1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PPP1R3EQ9H7J1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
PPP1R3EQ9H7J1 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.35■□□□□ 0.85
PPP1R3EQ9H7J1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.34■□□□□ 0.85
PPP1R3EQ9H7J1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.34■□□□□ 0.85
PPP1R3EQ9H7J1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PPP1R3EQ9H7J1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PPP1R3EQ9H7J1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PPP1R3EQ9H7J1 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PPP1R3EQ9H7J1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PPP1R3EQ9H7J1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PPP1R3EQ9H7J1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PPP1R3EQ9H7J1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.34■□□□□ 0.85
PPP1R3EQ9H7J1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PPP1R3EQ9H7J1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PPP1R3EQ9H7J1 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PPP1R3EQ9H7J1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
PPP1R3EQ9H7J1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PPP1R3EQ9H7J1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
PPP1R3EQ9H7J1 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PPP1R3EQ9H7J1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.33■□□□□ 0.84
PPP1R3EQ9H7J1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PPP1R3EQ9H7J1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.33■□□□□ 0.84
PPP1R3EQ9H7J1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.33■□□□□ 0.84
PPP1R3EQ9H7J1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.32■□□□□ 0.84
PPP1R3EQ9H7J1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPP1R3EQ9H7J1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms