Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.18■■□□□ 1.3
CLPBQ9H078 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.18■■□□□ 1.3
CLPBQ9H078 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.18■■□□□ 1.3
CLPBQ9H078 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.18■■□□□ 1.3
CLPBQ9H078 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.18■■□□□ 1.3
CLPBQ9H078 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CLPBQ9H078 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLPBQ9H078 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.17■■□□□ 1.3
CLPBQ9H078 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CLPBQ9H078 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLPBQ9H078 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLPBQ9H078 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CLPBQ9H078 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.17■■□□□ 1.3
CLPBQ9H078 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLPBQ9H078 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CLPBQ9H078 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.17■■□□□ 1.3
CLPBQ9H078 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.17■■□□□ 1.3
CLPBQ9H078 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.17■■□□□ 1.3
CLPBQ9H078 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.17■■□□□ 1.3
CLPBQ9H078 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CLPBQ9H078 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CLPBQ9H078 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.17■■□□□ 1.3
CLPBQ9H078 AL139125.2-201ENST00000623134 1869 ntBASIC23.17■■□□□ 1.3
CLPBQ9H078 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLPBQ9H078 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLPBQ9H078 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CLPBQ9H078 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.16■■□□□ 1.3
CLPBQ9H078 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.16■■□□□ 1.3
CLPBQ9H078 TSPY9P-201ENST00000440215 945 ntBASIC23.16■■□□□ 1.3
CLPBQ9H078 TSPY11P-201ENST00000442607 1045 ntBASIC23.16■■□□□ 1.3
CLPBQ9H078 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLPBQ9H078 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CLPBQ9H078 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.16■■□□□ 1.3
CLPBQ9H078 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CLPBQ9H078 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.15■■□□□ 1.3
CLPBQ9H078 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.15■■□□□ 1.3
CLPBQ9H078 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CLPBQ9H078 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.15■■□□□ 1.3
CLPBQ9H078 KRT16P3-201ENST00000439127 1283 ntBASIC23.15■■□□□ 1.3
CLPBQ9H078 AC011551.1-201ENST00000614101 683 ntBASIC23.15■■□□□ 1.3
CLPBQ9H078 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.15■■□□□ 1.3
CLPBQ9H078 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CLPBQ9H078 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
CLPBQ9H078 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLPBQ9H078 AC090877.2-201ENST00000558441 1738 ntBASIC23.14■■□□□ 1.3
CLPBQ9H078 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CLPBQ9H078 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.14■■□□□ 1.29
CLPBQ9H078 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.14■■□□□ 1.29
CLPBQ9H078 AC092028.1-203ENST00000608262 953 ntBASIC23.14■■□□□ 1.29
CLPBQ9H078 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CLPBQ9H078 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
CLPBQ9H078 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CLPBQ9H078 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.14■■□□□ 1.29
CLPBQ9H078 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CLPBQ9H078 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLPBQ9H078 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLPBQ9H078 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLPBQ9H078 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.13■■□□□ 1.29
CLPBQ9H078 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
CLPBQ9H078 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLPBQ9H078 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CLPBQ9H078 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLPBQ9H078 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.12■■□□□ 1.29
CLPBQ9H078 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CLPBQ9H078 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
CLPBQ9H078 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CLPBQ9H078 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CLPBQ9H078 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CLPBQ9H078 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.11■■□□□ 1.29
CLPBQ9H078 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
CLPBQ9H078 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
CLPBQ9H078 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CLPBQ9H078 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.1■■□□□ 1.29
CLPBQ9H078 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.1■■□□□ 1.29
CLPBQ9H078 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CLPBQ9H078 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CLPBQ9H078 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CLPBQ9H078 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
CLPBQ9H078 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CLPBQ9H078 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.09■■□□□ 1.29
CLPBQ9H078 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLPBQ9H078 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.09■■□□□ 1.29
CLPBQ9H078 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
CLPBQ9H078 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.09■■□□□ 1.29
CLPBQ9H078 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.09■■□□□ 1.29
CLPBQ9H078 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CLPBQ9H078 LINC01124-201ENST00000409786 2117 ntBASIC23.09■■□□□ 1.29
CLPBQ9H078 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLPBQ9H078 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.08■■□□□ 1.29
CLPBQ9H078 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
CLPBQ9H078 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CLPBQ9H078 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.08■■□□□ 1.29
CLPBQ9H078 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CLPBQ9H078 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CLPBQ9H078 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CLPBQ9H078 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.08■■□□□ 1.28
CLPBQ9H078 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLPBQ9H078 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLPBQ9H078 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLPBQ9H078 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms