Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
VRK1Q99986 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
VRK1Q99986 Z92544.1-202ENST00000571933 1220 ntBASIC20.2■□□□□ 0.82
VRK1Q99986 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
VRK1Q99986 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
VRK1Q99986 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VRK1Q99986 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VRK1Q99986 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VRK1Q99986 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
VRK1Q99986 AC120024.1-201ENST00000562672 995 ntBASIC20.19■□□□□ 0.82
VRK1Q99986 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VRK1Q99986 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.19■□□□□ 0.82
VRK1Q99986 AC131212.1-201ENST00000613771 668 ntBASIC20.19■□□□□ 0.82
VRK1Q99986 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
VRK1Q99986 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VRK1Q99986 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
VRK1Q99986 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VRK1Q99986 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VRK1Q99986 AC010501.1-201ENST00000606270 1962 ntBASIC20.18■□□□□ 0.82
VRK1Q99986 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VRK1Q99986 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VRK1Q99986 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.18■□□□□ 0.82
VRK1Q99986 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
VRK1Q99986 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VRK1Q99986 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VRK1Q99986 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
VRK1Q99986 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VRK1Q99986 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.17■□□□□ 0.82
VRK1Q99986 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
VRK1Q99986 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
VRK1Q99986 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.17■□□□□ 0.82
VRK1Q99986 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.17■□□□□ 0.82
VRK1Q99986 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VRK1Q99986 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
VRK1Q99986 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.16■□□□□ 0.82
VRK1Q99986 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
VRK1Q99986 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.16■□□□□ 0.82
VRK1Q99986 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
VRK1Q99986 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VRK1Q99986 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.15■□□□□ 0.82
VRK1Q99986 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.15■□□□□ 0.82
VRK1Q99986 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
VRK1Q99986 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
VRK1Q99986 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
VRK1Q99986 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
VRK1Q99986 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
VRK1Q99986 MIR4787-201ENST00000607364 84 ntBASIC20.15■□□□□ 0.82
VRK1Q99986 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.15■□□□□ 0.82
VRK1Q99986 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VRK1Q99986 LINC00543-201ENST00000567234 1845 ntBASIC20.15■□□□□ 0.82
VRK1Q99986 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.15■□□□□ 0.82
VRK1Q99986 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
VRK1Q99986 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VRK1Q99986 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VRK1Q99986 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VRK1Q99986 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
VRK1Q99986 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VRK1Q99986 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VRK1Q99986 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VRK1Q99986 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
VRK1Q99986 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.14■□□□□ 0.81
VRK1Q99986 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
VRK1Q99986 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
VRK1Q99986 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
VRK1Q99986 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.14■□□□□ 0.81
VRK1Q99986 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VRK1Q99986 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
VRK1Q99986 AC068473.5-201ENST00000616428 2072 ntBASIC20.14■□□□□ 0.81
VRK1Q99986 AC079834.2-201ENST00000609776 1949 ntBASIC20.14■□□□□ 0.81
VRK1Q99986 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VRK1Q99986 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
VRK1Q99986 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.13■□□□□ 0.81
VRK1Q99986 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VRK1Q99986 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VRK1Q99986 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.13■□□□□ 0.81
VRK1Q99986 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.13■□□□□ 0.81
VRK1Q99986 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VRK1Q99986 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VRK1Q99986 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VRK1Q99986 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VRK1Q99986 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
VRK1Q99986 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.12■□□□□ 0.81
VRK1Q99986 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VRK1Q99986 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VRK1Q99986 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VRK1Q99986 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VRK1Q99986 AL356441.2-201ENST00000443009 864 ntBASIC20.12■□□□□ 0.81
VRK1Q99986 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VRK1Q99986 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VRK1Q99986 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VRK1Q99986 AC138932.3-201ENST00000567634 1902 ntBASIC20.12■□□□□ 0.81
VRK1Q99986 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VRK1Q99986 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VRK1Q99986 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.11■□□□□ 0.81
VRK1Q99986 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
VRK1Q99986 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
VRK1Q99986 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
VRK1Q99986 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VRK1Q99986 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.1■□□□□ 0.81
VRK1Q99986 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms