Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.2■■□□□ 1.14
RNF31Q96EP0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RNF31Q96EP0 MIR6724-1-201ENST00000616420 92 ntBASIC22.2■■□□□ 1.14
RNF31Q96EP0 MIR6724-2-201ENST00000616483 92 ntBASIC22.2■■□□□ 1.14
RNF31Q96EP0 MIR6724-4-201ENST00000617390 92 ntBASIC22.2■■□□□ 1.14
RNF31Q96EP0 MIR6724-3-201ENST00000622482 92 ntBASIC22.2■■□□□ 1.14
RNF31Q96EP0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.2■■□□□ 1.14
RNF31Q96EP0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
RNF31Q96EP0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.2■■□□□ 1.14
RNF31Q96EP0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RNF31Q96EP0 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.19■■□□□ 1.14
RNF31Q96EP0 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.19■■□□□ 1.14
RNF31Q96EP0 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.19■■□□□ 1.14
RNF31Q96EP0 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.19■■□□□ 1.14
RNF31Q96EP0 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RNF31Q96EP0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.18■■□□□ 1.14
RNF31Q96EP0 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
RNF31Q96EP0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
RNF31Q96EP0 MIR935-201ENST00000401179 91 ntBASIC22.18■■□□□ 1.14
RNF31Q96EP0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.18■■□□□ 1.14
RNF31Q96EP0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.18■■□□□ 1.14
RNF31Q96EP0 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.18■■□□□ 1.14
RNF31Q96EP0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF31Q96EP0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF31Q96EP0 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF31Q96EP0 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF31Q96EP0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RNF31Q96EP0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF31Q96EP0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.17■■□□□ 1.14
RNF31Q96EP0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.17■■□□□ 1.14
RNF31Q96EP0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.17■■□□□ 1.14
RNF31Q96EP0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
RNF31Q96EP0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF31Q96EP0 AC093323.1-202ENST00000635031 2045 ntBASIC22.16■■□□□ 1.14
RNF31Q96EP0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.16■■□□□ 1.14
RNF31Q96EP0 MIR3621-201ENST00000580529 85 ntBASIC22.16■■□□□ 1.14
RNF31Q96EP0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.16■■□□□ 1.14
RNF31Q96EP0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF31Q96EP0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF31Q96EP0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
RNF31Q96EP0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF31Q96EP0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
RNF31Q96EP0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
RNF31Q96EP0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.15■■□□□ 1.14
RNF31Q96EP0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.15■■□□□ 1.14
RNF31Q96EP0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF31Q96EP0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF31Q96EP0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF31Q96EP0 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.15■■□□□ 1.14
RNF31Q96EP0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.14■■□□□ 1.14
RNF31Q96EP0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
RNF31Q96EP0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.14■■□□□ 1.14
RNF31Q96EP0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RNF31Q96EP0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RNF31Q96EP0 AC096631.2-201ENST00000436136 790 ntBASIC22.14■■□□□ 1.13
RNF31Q96EP0 AL356740.2-201ENST00000601559 647 ntBASIC22.14■■□□□ 1.13
RNF31Q96EP0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RNF31Q96EP0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.14■■□□□ 1.13
RNF31Q96EP0 AC020928.2-201ENST00000588717 2197 ntBASIC22.14■■□□□ 1.13
RNF31Q96EP0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.13■■□□□ 1.13
RNF31Q96EP0 AC091060.1-201ENST00000623524 1766 ntBASIC22.13■■□□□ 1.13
RNF31Q96EP0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.13■■□□□ 1.13
RNF31Q96EP0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RNF31Q96EP0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RNF31Q96EP0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RNF31Q96EP0 SNX5-217ENST00000606557 1087 ntBASIC22.13■■□□□ 1.13
RNF31Q96EP0 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RNF31Q96EP0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
RNF31Q96EP0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.12■■□□□ 1.13
RNF31Q96EP0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF31Q96EP0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RNF31Q96EP0 MIR638-201ENST00000385237 100 ntBASIC22.12■■□□□ 1.13
RNF31Q96EP0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.12■■□□□ 1.13
RNF31Q96EP0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF31Q96EP0 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF31Q96EP0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF31Q96EP0 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF31Q96EP0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.11■■□□□ 1.13
RNF31Q96EP0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.11■■□□□ 1.13
RNF31Q96EP0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF31Q96EP0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.11■■□□□ 1.13
RNF31Q96EP0 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.11■■□□□ 1.13
RNF31Q96EP0 AC110285.6-201ENST00000617652 491 ntBASIC22.11■■□□□ 1.13
RNF31Q96EP0 SLC6A10P-202ENST00000431994 2058 ntBASIC22.11■■□□□ 1.13
RNF31Q96EP0 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RNF31Q96EP0 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
RNF31Q96EP0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.1■■□□□ 1.13
RNF31Q96EP0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RNF31Q96EP0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RNF31Q96EP0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.1■■□□□ 1.13
RNF31Q96EP0 AL512631.2-201ENST00000604634 923 ntBASIC22.1■■□□□ 1.13
RNF31Q96EP0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.1■■□□□ 1.13
RNF31Q96EP0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RNF31Q96EP0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RNF31Q96EP0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RNF31Q96EP0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF31Q96EP0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF31Q96EP0 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF31Q96EP0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.08■■□□□ 1.13
RNF31Q96EP0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms