Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DNAAF1Q8NEP3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
DNAAF1Q8NEP3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DNAAF1Q8NEP3 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
DNAAF1Q8NEP3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DNAAF1Q8NEP3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DNAAF1Q8NEP3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.21■□□□□ 0.83
DNAAF1Q8NEP3 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DNAAF1Q8NEP3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
DNAAF1Q8NEP3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.21■□□□□ 0.83
DNAAF1Q8NEP3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
DNAAF1Q8NEP3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
DNAAF1Q8NEP3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
DNAAF1Q8NEP3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
DNAAF1Q8NEP3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DNAAF1Q8NEP3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
DNAAF1Q8NEP3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DNAAF1Q8NEP3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DNAAF1Q8NEP3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DNAAF1Q8NEP3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.2■□□□□ 0.82
DNAAF1Q8NEP3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
DNAAF1Q8NEP3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
DNAAF1Q8NEP3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
DNAAF1Q8NEP3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
DNAAF1Q8NEP3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
DNAAF1Q8NEP3 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.19■□□□□ 0.82
DNAAF1Q8NEP3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DNAAF1Q8NEP3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DNAAF1Q8NEP3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DNAAF1Q8NEP3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DNAAF1Q8NEP3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.19■□□□□ 0.82
DNAAF1Q8NEP3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DNAAF1Q8NEP3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DNAAF1Q8NEP3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DNAAF1Q8NEP3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DNAAF1Q8NEP3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
DNAAF1Q8NEP3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DNAAF1Q8NEP3 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.18■□□□□ 0.82
DNAAF1Q8NEP3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
DNAAF1Q8NEP3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
DNAAF1Q8NEP3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
DNAAF1Q8NEP3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.18■□□□□ 0.82
DNAAF1Q8NEP3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
DNAAF1Q8NEP3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.17■□□□□ 0.82
DNAAF1Q8NEP3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
DNAAF1Q8NEP3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.17■□□□□ 0.82
DNAAF1Q8NEP3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
DNAAF1Q8NEP3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
DNAAF1Q8NEP3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.17■□□□□ 0.82
DNAAF1Q8NEP3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
DNAAF1Q8NEP3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.16■□□□□ 0.82
DNAAF1Q8NEP3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DNAAF1Q8NEP3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DNAAF1Q8NEP3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
DNAAF1Q8NEP3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DNAAF1Q8NEP3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
DNAAF1Q8NEP3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
DNAAF1Q8NEP3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
DNAAF1Q8NEP3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DNAAF1Q8NEP3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
DNAAF1Q8NEP3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DNAAF1Q8NEP3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
DNAAF1Q8NEP3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DNAAF1Q8NEP3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.15■□□□□ 0.82
DNAAF1Q8NEP3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DNAAF1Q8NEP3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DNAAF1Q8NEP3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DNAAF1Q8NEP3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.15■□□□□ 0.82
DNAAF1Q8NEP3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
DNAAF1Q8NEP3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.15■□□□□ 0.82
DNAAF1Q8NEP3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DNAAF1Q8NEP3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DNAAF1Q8NEP3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
DNAAF1Q8NEP3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
DNAAF1Q8NEP3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
DNAAF1Q8NEP3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.14■□□□□ 0.82
DNAAF1Q8NEP3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.14■□□□□ 0.81
DNAAF1Q8NEP3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
DNAAF1Q8NEP3 RNF126P1-201ENST00000567452 1320 ntBASIC20.14■□□□□ 0.81
DNAAF1Q8NEP3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
DNAAF1Q8NEP3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.14■□□□□ 0.81
DNAAF1Q8NEP3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
DNAAF1Q8NEP3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DNAAF1Q8NEP3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DNAAF1Q8NEP3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
DNAAF1Q8NEP3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DNAAF1Q8NEP3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
DNAAF1Q8NEP3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DNAAF1Q8NEP3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DNAAF1Q8NEP3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
DNAAF1Q8NEP3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DNAAF1Q8NEP3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.12■□□□□ 0.81
DNAAF1Q8NEP3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DNAAF1Q8NEP3 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DNAAF1Q8NEP3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DNAAF1Q8NEP3 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DNAAF1Q8NEP3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.12■□□□□ 0.81
DNAAF1Q8NEP3 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
DNAAF1Q8NEP3 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.12■□□□□ 0.81
DNAAF1Q8NEP3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms