Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC36.69■■■■□ 3.46
CFAP43Q8NDM7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC36.68■■■■□ 3.46
CFAP43Q8NDM7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC36.68■■■■□ 3.46
CFAP43Q8NDM7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC36.68■■■■□ 3.46
CFAP43Q8NDM7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC36.68■■■■□ 3.46
CFAP43Q8NDM7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC36.67■■■■□ 3.46
CFAP43Q8NDM7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC36.67■■■■□ 3.46
CFAP43Q8NDM7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC36.67■■■■□ 3.46
CFAP43Q8NDM7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC36.67■■■■□ 3.46
CFAP43Q8NDM7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC36.67■■■■□ 3.46
CFAP43Q8NDM7 MIR6089-201ENST00000616698 64 ntBASIC36.67■■■■□ 3.46
CFAP43Q8NDM7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC36.67■■■■□ 3.46
CFAP43Q8NDM7 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC36.66■■■■□ 3.46
CFAP43Q8NDM7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
CFAP43Q8NDM7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC36.66■■■■□ 3.46
CFAP43Q8NDM7 SF1-220ENST00000626028 704 ntTSL 2 BASIC36.66■■■■□ 3.46
CFAP43Q8NDM7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
CFAP43Q8NDM7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC36.65■■■■□ 3.46
CFAP43Q8NDM7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC36.65■■■■□ 3.46
CFAP43Q8NDM7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC36.65■■■■□ 3.46
CFAP43Q8NDM7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC36.65■■■■□ 3.46
CFAP43Q8NDM7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
CFAP43Q8NDM7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC36.64■■■■□ 3.46
CFAP43Q8NDM7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC36.64■■■■□ 3.46
CFAP43Q8NDM7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC36.64■■■■□ 3.46
CFAP43Q8NDM7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC36.63■■■■□ 3.45
CFAP43Q8NDM7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC36.63■■■■□ 3.45
CFAP43Q8NDM7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC36.63■■■■□ 3.45
CFAP43Q8NDM7 AC090877.2-201ENST00000558441 1738 ntBASIC36.63■■■■□ 3.45
CFAP43Q8NDM7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC36.62■■■■□ 3.45
CFAP43Q8NDM7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC36.62■■■■□ 3.45
CFAP43Q8NDM7 MIR6722-201ENST00000617286 78 ntBASIC36.62■■■■□ 3.45
CFAP43Q8NDM7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC36.62■■■■□ 3.45
CFAP43Q8NDM7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
CFAP43Q8NDM7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC36.61■■■■□ 3.45
CFAP43Q8NDM7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC36.61■■■■□ 3.45
CFAP43Q8NDM7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC36.61■■■■□ 3.45
CFAP43Q8NDM7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC36.61■■■■□ 3.45
CFAP43Q8NDM7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC36.61■■■■□ 3.45
CFAP43Q8NDM7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC36.6■■■■□ 3.45
CFAP43Q8NDM7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC36.6■■■■□ 3.45
CFAP43Q8NDM7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC36.6■■■■□ 3.45
CFAP43Q8NDM7 SRD5A1P1-201ENST00000442297 786 ntBASIC36.6■■■■□ 3.45
CFAP43Q8NDM7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC36.6■■■■□ 3.45
CFAP43Q8NDM7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC36.6■■■■□ 3.45
CFAP43Q8NDM7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC36.59■■■■□ 3.45
CFAP43Q8NDM7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC36.59■■■■□ 3.45
CFAP43Q8NDM7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC36.59■■■■□ 3.45
CFAP43Q8NDM7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC36.59■■■■□ 3.45
CFAP43Q8NDM7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC36.59■■■■□ 3.45
CFAP43Q8NDM7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC36.59■■■■□ 3.45
CFAP43Q8NDM7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC36.58■■■■□ 3.45
CFAP43Q8NDM7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC36.58■■■■□ 3.45
CFAP43Q8NDM7 AC091305.1-201ENST00000479476 895 ntBASIC36.58■■■■□ 3.45
CFAP43Q8NDM7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC36.57■■■■□ 3.44
CFAP43Q8NDM7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC36.57■■■■□ 3.44
CFAP43Q8NDM7 AC090192.1-201ENST00000517740 490 ntBASIC36.57■■■■□ 3.44
CFAP43Q8NDM7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC36.57■■■■□ 3.44
CFAP43Q8NDM7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC36.57■■■■□ 3.44
CFAP43Q8NDM7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC36.57■■■■□ 3.44
CFAP43Q8NDM7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC36.56■■■■□ 3.44
CFAP43Q8NDM7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC36.56■■■■□ 3.44
CFAP43Q8NDM7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC36.56■■■■□ 3.44
CFAP43Q8NDM7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC36.56■■■■□ 3.44
CFAP43Q8NDM7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC36.56■■■■□ 3.44
CFAP43Q8NDM7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC36.55■■■■□ 3.44
CFAP43Q8NDM7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC36.55■■■■□ 3.44
CFAP43Q8NDM7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC36.55■■■■□ 3.44
CFAP43Q8NDM7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC36.54■■■■□ 3.44
CFAP43Q8NDM7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC36.54■■■■□ 3.44
CFAP43Q8NDM7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC36.54■■■■□ 3.44
CFAP43Q8NDM7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC36.54■■■■□ 3.44
CFAP43Q8NDM7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC36.53■■■■□ 3.44
CFAP43Q8NDM7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC36.53■■■■□ 3.44
CFAP43Q8NDM7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC36.53■■■■□ 3.44
CFAP43Q8NDM7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC36.53■■■■□ 3.44
CFAP43Q8NDM7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC36.53■■■■□ 3.44
CFAP43Q8NDM7 AC091060.1-201ENST00000623524 1766 ntBASIC36.53■■■■□ 3.44
CFAP43Q8NDM7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
CFAP43Q8NDM7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC36.52■■■■□ 3.44
CFAP43Q8NDM7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
CFAP43Q8NDM7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC36.51■■■■□ 3.44
CFAP43Q8NDM7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC36.51■■■■□ 3.43
CFAP43Q8NDM7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC36.5■■■■□ 3.43
CFAP43Q8NDM7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC36.5■■■■□ 3.43
CFAP43Q8NDM7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC36.5■■■■□ 3.43
CFAP43Q8NDM7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC36.5■■■■□ 3.43
CFAP43Q8NDM7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC36.49■■■■□ 3.43
CFAP43Q8NDM7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC36.49■■■■□ 3.43
CFAP43Q8NDM7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC36.49■■■■□ 3.43
CFAP43Q8NDM7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC36.49■■■■□ 3.43
CFAP43Q8NDM7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC36.48■■■■□ 3.43
CFAP43Q8NDM7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC36.48■■■■□ 3.43
CFAP43Q8NDM7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC36.48■■■■□ 3.43
CFAP43Q8NDM7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC36.48■■■■□ 3.43
CFAP43Q8NDM7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC36.48■■■■□ 3.43
CFAP43Q8NDM7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC36.47■■■■□ 3.43
CFAP43Q8NDM7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC36.47■■■■□ 3.43
CFAP43Q8NDM7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC36.47■■■■□ 3.43
CFAP43Q8NDM7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC36.47■■■■□ 3.43
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms