Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RNF135Q8IUD6 MIR939-201ENST00000401314 82 ntBASIC24.5■■□□□ 1.51
RNF135Q8IUD6 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.5■■□□□ 1.51
RNF135Q8IUD6 AC091060.1-201ENST00000623524 1766 ntBASIC24.49■■□□□ 1.51
RNF135Q8IUD6 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.49■■□□□ 1.51
RNF135Q8IUD6 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC24.49■■□□□ 1.51
RNF135Q8IUD6 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC24.49■■□□□ 1.51
RNF135Q8IUD6 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RNF135Q8IUD6 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC24.48■■□□□ 1.51
RNF135Q8IUD6 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC24.46■■□□□ 1.51
RNF135Q8IUD6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
RNF135Q8IUD6 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC24.46■■□□□ 1.51
RNF135Q8IUD6 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.46■■□□□ 1.51
RNF135Q8IUD6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.45■■□□□ 1.51
RNF135Q8IUD6 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
RNF135Q8IUD6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.45■■□□□ 1.5
RNF135Q8IUD6 AC090192.1-201ENST00000517740 490 ntBASIC24.45■■□□□ 1.5
RNF135Q8IUD6 AP001330.3-201ENST00000520123 633 ntBASIC24.45■■□□□ 1.5
RNF135Q8IUD6 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
RNF135Q8IUD6 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.45■■□□□ 1.5
RNF135Q8IUD6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RNF135Q8IUD6 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC24.45■■□□□ 1.5
RNF135Q8IUD6 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
RNF135Q8IUD6 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
RNF135Q8IUD6 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.44■■□□□ 1.5
RNF135Q8IUD6 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RNF135Q8IUD6 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC24.44■■□□□ 1.5
RNF135Q8IUD6 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
RNF135Q8IUD6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RNF135Q8IUD6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RNF135Q8IUD6 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.43■■□□□ 1.5
RNF135Q8IUD6 AC092803.2-201ENST00000564287 1899 ntBASIC24.43■■□□□ 1.5
RNF135Q8IUD6 MIR6722-201ENST00000617286 78 ntBASIC24.43■■□□□ 1.5
RNF135Q8IUD6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RNF135Q8IUD6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RNF135Q8IUD6 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.43■■□□□ 1.5
RNF135Q8IUD6 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RNF135Q8IUD6 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RNF135Q8IUD6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RNF135Q8IUD6 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RNF135Q8IUD6 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF135Q8IUD6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RNF135Q8IUD6 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RNF135Q8IUD6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RNF135Q8IUD6 AC091305.1-201ENST00000479476 895 ntBASIC24.42■■□□□ 1.5
RNF135Q8IUD6 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC24.42■■□□□ 1.5
RNF135Q8IUD6 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.42■■□□□ 1.5
RNF135Q8IUD6 RARRES2P11-201ENST00000635158 484 ntBASIC24.42■■□□□ 1.5
RNF135Q8IUD6 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC24.42■■□□□ 1.5
RNF135Q8IUD6 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF135Q8IUD6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RNF135Q8IUD6 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.41■■□□□ 1.5
RNF135Q8IUD6 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.41■■□□□ 1.5
RNF135Q8IUD6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.41■■□□□ 1.5
RNF135Q8IUD6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RNF135Q8IUD6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RNF135Q8IUD6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
RNF135Q8IUD6 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RNF135Q8IUD6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RNF135Q8IUD6 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RNF135Q8IUD6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC24.4■■□□□ 1.5
RNF135Q8IUD6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RNF135Q8IUD6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
RNF135Q8IUD6 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RNF135Q8IUD6 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
RNF135Q8IUD6 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
RNF135Q8IUD6 SNX5-217ENST00000606557 1087 ntBASIC24.39■■□□□ 1.49
RNF135Q8IUD6 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RNF135Q8IUD6 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
RNF135Q8IUD6 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
RNF135Q8IUD6 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RNF135Q8IUD6 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF135Q8IUD6 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF135Q8IUD6 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF135Q8IUD6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC24.38■■□□□ 1.49
RNF135Q8IUD6 AC004448.1-201ENST00000458332 883 ntBASIC24.38■■□□□ 1.49
RNF135Q8IUD6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC24.38■■□□□ 1.49
RNF135Q8IUD6 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.38■■□□□ 1.49
RNF135Q8IUD6 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RNF135Q8IUD6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.38■■□□□ 1.49
RNF135Q8IUD6 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RNF135Q8IUD6 GATM-206ENST00000558336 1522 ntTSL 2 BASIC24.37■■□□□ 1.49
RNF135Q8IUD6 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RNF135Q8IUD6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC24.37■■□□□ 1.49
RNF135Q8IUD6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RNF135Q8IUD6 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RNF135Q8IUD6 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RNF135Q8IUD6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC24.36■■□□□ 1.49
RNF135Q8IUD6 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
RNF135Q8IUD6 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RNF135Q8IUD6 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
RNF135Q8IUD6 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RNF135Q8IUD6 DUX4L19-201ENST00000557448 1267 ntBASIC24.35■■□□□ 1.49
RNF135Q8IUD6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.35■■□□□ 1.49
RNF135Q8IUD6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
RNF135Q8IUD6 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
RNF135Q8IUD6 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RNF135Q8IUD6 AC096887.2-201ENST00000623443 1957 ntBASIC24.34■■□□□ 1.49
RNF135Q8IUD6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.34■■□□□ 1.49
RNF135Q8IUD6 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms