Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
CDHR3Q6ZTQ4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDHR3Q6ZTQ4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.21■■□□□ 1.31
CDHR3Q6ZTQ4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDHR3Q6ZTQ4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDHR3Q6ZTQ4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CDHR3Q6ZTQ4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CDHR3Q6ZTQ4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDHR3Q6ZTQ4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDHR3Q6ZTQ4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
CDHR3Q6ZTQ4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.2■■□□□ 1.3
CDHR3Q6ZTQ4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDHR3Q6ZTQ4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CDHR3Q6ZTQ4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CDHR3Q6ZTQ4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CDHR3Q6ZTQ4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
CDHR3Q6ZTQ4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDHR3Q6ZTQ4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDHR3Q6ZTQ4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDHR3Q6ZTQ4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
CDHR3Q6ZTQ4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.19■■□□□ 1.3
CDHR3Q6ZTQ4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CDHR3Q6ZTQ4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CDHR3Q6ZTQ4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.18■■□□□ 1.3
CDHR3Q6ZTQ4 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
CDHR3Q6ZTQ4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDHR3Q6ZTQ4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CDHR3Q6ZTQ4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CDHR3Q6ZTQ4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.17■■□□□ 1.3
CDHR3Q6ZTQ4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDHR3Q6ZTQ4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDHR3Q6ZTQ4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.17■■□□□ 1.3
CDHR3Q6ZTQ4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
CDHR3Q6ZTQ4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDHR3Q6ZTQ4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
CDHR3Q6ZTQ4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDHR3Q6ZTQ4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDHR3Q6ZTQ4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDHR3Q6ZTQ4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDHR3Q6ZTQ4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDHR3Q6ZTQ4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDHR3Q6ZTQ4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CDHR3Q6ZTQ4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.16■■□□□ 1.3
CDHR3Q6ZTQ4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDHR3Q6ZTQ4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.16■■□□□ 1.3
CDHR3Q6ZTQ4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.16■■□□□ 1.3
CDHR3Q6ZTQ4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
CDHR3Q6ZTQ4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.16■■□□□ 1.3
CDHR3Q6ZTQ4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.15■■□□□ 1.3
CDHR3Q6ZTQ4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDHR3Q6ZTQ4 BHLHE23-202ENST00000612929 1109 ntBASIC23.15■■□□□ 1.3
CDHR3Q6ZTQ4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CDHR3Q6ZTQ4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.15■■□□□ 1.3
CDHR3Q6ZTQ4 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDHR3Q6ZTQ4 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.14■■□□□ 1.3
CDHR3Q6ZTQ4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CDHR3Q6ZTQ4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
CDHR3Q6ZTQ4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.14■■□□□ 1.29
CDHR3Q6ZTQ4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
CDHR3Q6ZTQ4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CDHR3Q6ZTQ4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.14■■□□□ 1.29
CDHR3Q6ZTQ4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CDHR3Q6ZTQ4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDHR3Q6ZTQ4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDHR3Q6ZTQ4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CDHR3Q6ZTQ4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
CDHR3Q6ZTQ4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
CDHR3Q6ZTQ4 AC139795.1-202ENST00000500444 432 ntBASIC23.13■■□□□ 1.29
CDHR3Q6ZTQ4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDHR3Q6ZTQ4 FOXO3B-201ENST00000395675 1928 ntBASIC23.12■■□□□ 1.29
CDHR3Q6ZTQ4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDHR3Q6ZTQ4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.12■■□□□ 1.29
CDHR3Q6ZTQ4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDHR3Q6ZTQ4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDHR3Q6ZTQ4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDHR3Q6ZTQ4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDHR3Q6ZTQ4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.11■■□□□ 1.29
CDHR3Q6ZTQ4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
CDHR3Q6ZTQ4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.11■■□□□ 1.29
CDHR3Q6ZTQ4 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.11■■□□□ 1.29
CDHR3Q6ZTQ4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.11■■□□□ 1.29
CDHR3Q6ZTQ4 AC010980.1-201ENST00000587192 1142 ntBASIC23.11■■□□□ 1.29
CDHR3Q6ZTQ4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDHR3Q6ZTQ4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CDHR3Q6ZTQ4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CDHR3Q6ZTQ4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDHR3Q6ZTQ4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.1■■□□□ 1.29
CDHR3Q6ZTQ4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.1■■□□□ 1.29
CDHR3Q6ZTQ4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDHR3Q6ZTQ4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDHR3Q6ZTQ4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDHR3Q6ZTQ4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
CDHR3Q6ZTQ4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.1■■□□□ 1.29
CDHR3Q6ZTQ4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CDHR3Q6ZTQ4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDHR3Q6ZTQ4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.09■■□□□ 1.29
CDHR3Q6ZTQ4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.09■■□□□ 1.29
CDHR3Q6ZTQ4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDHR3Q6ZTQ4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.09■■□□□ 1.29
CDHR3Q6ZTQ4 RARRES2P1-201ENST00000474487 481 ntBASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms