Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.66■□□□□ 0.58
SPCS3P61009 AC022413.1-201ENST00000624602 984 ntBASIC18.66■□□□□ 0.58
SPCS3P61009 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPCS3P61009 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPCS3P61009 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPCS3P61009 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPCS3P61009 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.65■□□□□ 0.58
SPCS3P61009 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPCS3P61009 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SPCS3P61009 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SPCS3P61009 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.65■□□□□ 0.58
SPCS3P61009 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPCS3P61009 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPCS3P61009 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPCS3P61009 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.65■□□□□ 0.58
SPCS3P61009 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPCS3P61009 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.65■□□□□ 0.58
SPCS3P61009 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPCS3P61009 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPCS3P61009 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.64■□□□□ 0.58
SPCS3P61009 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SPCS3P61009 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SPCS3P61009 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SPCS3P61009 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPCS3P61009 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPCS3P61009 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
SPCS3P61009 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPCS3P61009 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.64■□□□□ 0.57
SPCS3P61009 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.64■□□□□ 0.57
SPCS3P61009 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.64■□□□□ 0.57
SPCS3P61009 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.64■□□□□ 0.57
SPCS3P61009 AC007029.1-201ENST00000604183 313 ntBASIC18.64■□□□□ 0.57
SPCS3P61009 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.64■□□□□ 0.57
SPCS3P61009 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SPCS3P61009 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
SPCS3P61009 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SPCS3P61009 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.63■□□□□ 0.57
SPCS3P61009 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SPCS3P61009 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.63■□□□□ 0.57
SPCS3P61009 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SPCS3P61009 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SPCS3P61009 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SPCS3P61009 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SPCS3P61009 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPCS3P61009 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPCS3P61009 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SPCS3P61009 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPCS3P61009 RNF165-205ENST00000588679 2904 ntBASIC18.62■□□□□ 0.57
SPCS3P61009 MIR639-201ENST00000384974 98 ntBASIC18.62■□□□□ 0.57
SPCS3P61009 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SPCS3P61009 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
SPCS3P61009 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPCS3P61009 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.62■□□□□ 0.57
SPCS3P61009 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPCS3P61009 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SPCS3P61009 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPCS3P61009 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPCS3P61009 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.61■□□□□ 0.57
SPCS3P61009 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPCS3P61009 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SPCS3P61009 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SPCS3P61009 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.61■□□□□ 0.57
SPCS3P61009 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SPCS3P61009 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPCS3P61009 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.61■□□□□ 0.57
SPCS3P61009 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPCS3P61009 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SPCS3P61009 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SPCS3P61009 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.61■□□□□ 0.57
SPCS3P61009 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPCS3P61009 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPCS3P61009 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPCS3P61009 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SPCS3P61009 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPCS3P61009 SLC25A24-204ENST00000569674 2357 ntBASIC18.6■□□□□ 0.57
SPCS3P61009 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.6■□□□□ 0.57
SPCS3P61009 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPCS3P61009 RAP2CP1-202ENST00000605179 643 ntBASIC18.6■□□□□ 0.57
SPCS3P61009 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPCS3P61009 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SPCS3P61009 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SPCS3P61009 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SPCS3P61009 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPCS3P61009 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPCS3P61009 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPCS3P61009 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SPCS3P61009 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPCS3P61009 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPCS3P61009 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPCS3P61009 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPCS3P61009 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
SPCS3P61009 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.59■□□□□ 0.57
SPCS3P61009 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPCS3P61009 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.59■□□□□ 0.57
SPCS3P61009 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.59■□□□□ 0.57
SPCS3P61009 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPCS3P61009 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPCS3P61009 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SPCS3P61009 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SPCS3P61009 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms