Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATP1B3P54709 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
ATP1B3P54709 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP1B3P54709 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP1B3P54709 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATP1B3P54709 RARRES2P2-201ENST00000394842 485 ntBASIC19.92■□□□□ 0.78
ATP1B3P54709 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP1B3P54709 CLDN5-201ENST00000403084 2357 ntBASIC19.92■□□□□ 0.78
ATP1B3P54709 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.92■□□□□ 0.78
ATP1B3P54709 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP1B3P54709 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP1B3P54709 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.91■□□□□ 0.78
ATP1B3P54709 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.91■□□□□ 0.78
ATP1B3P54709 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.91■□□□□ 0.78
ATP1B3P54709 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
ATP1B3P54709 MIR6765-201ENST00000614092 87 ntBASIC19.91■□□□□ 0.78
ATP1B3P54709 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.91■□□□□ 0.78
ATP1B3P54709 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.91■□□□□ 0.78
ATP1B3P54709 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATP1B3P54709 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.91■□□□□ 0.78
ATP1B3P54709 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP1B3P54709 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.9■□□□□ 0.78
ATP1B3P54709 SPCS2P3-201ENST00000500401 656 ntBASIC19.9■□□□□ 0.78
ATP1B3P54709 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.9■□□□□ 0.78
ATP1B3P54709 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP1B3P54709 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP1B3P54709 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.9■□□□□ 0.78
ATP1B3P54709 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP1B3P54709 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.9■□□□□ 0.78
ATP1B3P54709 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP1B3P54709 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.9■□□□□ 0.78
ATP1B3P54709 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
ATP1B3P54709 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATP1B3P54709 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATP1B3P54709 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATP1B3P54709 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATP1B3P54709 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATP1B3P54709 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATP1B3P54709 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATP1B3P54709 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.89■□□□□ 0.77
ATP1B3P54709 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP1B3P54709 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP1B3P54709 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
ATP1B3P54709 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP1B3P54709 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATP1B3P54709 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.88■□□□□ 0.77
ATP1B3P54709 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.88■□□□□ 0.77
ATP1B3P54709 AC087393.1-201ENST00000582896 145 ntBASIC19.88■□□□□ 0.77
ATP1B3P54709 HSD17B1P1-201ENST00000590052 955 ntBASIC19.88■□□□□ 0.77
ATP1B3P54709 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP1B3P54709 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP1B3P54709 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
ATP1B3P54709 AC004812.2-201ENST00000611079 2094 ntBASIC19.87■□□□□ 0.77
ATP1B3P54709 AL592295.1-201ENST00000400984 884 ntBASIC19.87■□□□□ 0.77
ATP1B3P54709 DUX4L9-201ENST00000449051 1259 ntBASIC19.87■□□□□ 0.77
ATP1B3P54709 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.87■□□□□ 0.77
ATP1B3P54709 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP1B3P54709 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ATP1B3P54709 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP1B3P54709 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP1B3P54709 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP1B3P54709 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
ATP1B3P54709 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP1B3P54709 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.86■□□□□ 0.77
ATP1B3P54709 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP1B3P54709 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ATP1B3P54709 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP1B3P54709 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP1B3P54709 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.86■□□□□ 0.77
ATP1B3P54709 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP1B3P54709 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.86■□□□□ 0.77
ATP1B3P54709 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ATP1B3P54709 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ATP1B3P54709 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP1B3P54709 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP1B3P54709 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP1B3P54709 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.85■□□□□ 0.77
ATP1B3P54709 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP1B3P54709 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP1B3P54709 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP1B3P54709 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP1B3P54709 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP1B3P54709 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP1B3P54709 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP1B3P54709 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATP1B3P54709 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP1B3P54709 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATP1B3P54709 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP1B3P54709 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.84■□□□□ 0.77
ATP1B3P54709 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
ATP1B3P54709 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ATP1B3P54709 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.84■□□□□ 0.77
ATP1B3P54709 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.84■□□□□ 0.77
ATP1B3P54709 U85056.1-201ENST00000616429 682 ntBASIC19.84■□□□□ 0.77
ATP1B3P54709 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP1B3P54709 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP1B3P54709 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
ATP1B3P54709 AC090877.2-201ENST00000558441 1738 ntBASIC19.84■□□□□ 0.77
ATP1B3P54709 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP1B3P54709 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms