Protein–RNA interactions for Protein: P52799

EFNB2, Ephrin-B2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2P52799 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EFNB2P52799 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.93■□□□□ 0.78
EFNB2P52799 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EFNB2P52799 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
EFNB2P52799 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EFNB2P52799 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EFNB2P52799 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
EFNB2P52799 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
EFNB2P52799 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EFNB2P52799 CLDN5-201ENST00000403084 2357 ntBASIC19.92■□□□□ 0.78
EFNB2P52799 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.92■□□□□ 0.78
EFNB2P52799 NTF6A-201ENST00000591175 560 ntBASIC19.92■□□□□ 0.78
EFNB2P52799 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
EFNB2P52799 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
EFNB2P52799 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
EFNB2P52799 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
EFNB2P52799 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EFNB2P52799 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.91■□□□□ 0.78
EFNB2P52799 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
EFNB2P52799 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
EFNB2P52799 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
EFNB2P52799 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
EFNB2P52799 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EFNB2P52799 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
EFNB2P52799 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
EFNB2P52799 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EFNB2P52799 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EFNB2P52799 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
EFNB2P52799 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
EFNB2P52799 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EFNB2P52799 SMPD5-203ENST00000639008 1464 ntBASIC19.9■□□□□ 0.78
EFNB2P52799 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
EFNB2P52799 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.9■□□□□ 0.78
EFNB2P52799 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EFNB2P52799 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
EFNB2P52799 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EFNB2P52799 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
EFNB2P52799 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.89■□□□□ 0.77
EFNB2P52799 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
EFNB2P52799 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.89■□□□□ 0.77
EFNB2P52799 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
EFNB2P52799 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.89■□□□□ 0.77
EFNB2P52799 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
EFNB2P52799 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.88■□□□□ 0.77
EFNB2P52799 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
EFNB2P52799 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.88■□□□□ 0.77
EFNB2P52799 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
EFNB2P52799 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
EFNB2P52799 AC092296.2-201ENST00000589470 999 ntBASIC19.88■□□□□ 0.77
EFNB2P52799 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
EFNB2P52799 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
EFNB2P52799 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
EFNB2P52799 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
EFNB2P52799 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
EFNB2P52799 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
EFNB2P52799 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.87■□□□□ 0.77
EFNB2P52799 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
EFNB2P52799 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
EFNB2P52799 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
EFNB2P52799 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
EFNB2P52799 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
EFNB2P52799 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.86■□□□□ 0.77
EFNB2P52799 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
EFNB2P52799 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
EFNB2P52799 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
EFNB2P52799 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
EFNB2P52799 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.86■□□□□ 0.77
EFNB2P52799 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
EFNB2P52799 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
EFNB2P52799 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.86■□□□□ 0.77
EFNB2P52799 AL117328.2-201ENST00000624617 1940 ntBASIC19.86■□□□□ 0.77
EFNB2P52799 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
EFNB2P52799 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
EFNB2P52799 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
EFNB2P52799 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
EFNB2P52799 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
EFNB2P52799 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
EFNB2P52799 FOXO3B-201ENST00000395675 1928 ntBASIC19.85■□□□□ 0.77
EFNB2P52799 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.85■□□□□ 0.77
EFNB2P52799 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
EFNB2P52799 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
EFNB2P52799 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
EFNB2P52799 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
EFNB2P52799 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.85■□□□□ 0.77
EFNB2P52799 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
EFNB2P52799 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
EFNB2P52799 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
EFNB2P52799 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
EFNB2P52799 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
EFNB2P52799 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
EFNB2P52799 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.84■□□□□ 0.77
EFNB2P52799 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.84■□□□□ 0.77
EFNB2P52799 AC012354.3-201ENST00000623734 483 ntBASIC19.84■□□□□ 0.77
EFNB2P52799 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
EFNB2P52799 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
EFNB2P52799 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
EFNB2P52799 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.84■□□□□ 0.77
EFNB2P52799 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.84■□□□□ 0.77
EFNB2P52799 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
EFNB2P52799 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms