Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
PRIM2P49643 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PRIM2P49643 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRIM2P49643 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PRIM2P49643 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRIM2P49643 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRIM2P49643 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.82■■□□□ 1.08
PRIM2P49643 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
PRIM2P49643 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.82■■□□□ 1.08
PRIM2P49643 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRIM2P49643 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PRIM2P49643 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PRIM2P49643 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
PRIM2P49643 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PRIM2P49643 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRIM2P49643 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PRIM2P49643 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRIM2P49643 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PRIM2P49643 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.81■■□□□ 1.08
PRIM2P49643 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
PRIM2P49643 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRIM2P49643 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.81■■□□□ 1.08
PRIM2P49643 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRIM2P49643 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRIM2P49643 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRIM2P49643 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRIM2P49643 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRIM2P49643 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
PRIM2P49643 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRIM2P49643 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRIM2P49643 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRIM2P49643 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PRIM2P49643 ABCB10P4-201ENST00000566803 2184 ntBASIC21.8■■□□□ 1.08
PRIM2P49643 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
PRIM2P49643 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRIM2P49643 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
PRIM2P49643 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRIM2P49643 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRIM2P49643 LONRF2P2-201ENST00000439212 571 ntBASIC21.8■■□□□ 1.08
PRIM2P49643 AC139795.1-202ENST00000500444 432 ntBASIC21.8■■□□□ 1.08
PRIM2P49643 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.8■■□□□ 1.08
PRIM2P49643 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRIM2P49643 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRIM2P49643 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.8■■□□□ 1.08
PRIM2P49643 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRIM2P49643 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PRIM2P49643 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRIM2P49643 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PRIM2P49643 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PRIM2P49643 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.79■■□□□ 1.08
PRIM2P49643 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRIM2P49643 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRIM2P49643 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRIM2P49643 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.79■■□□□ 1.08
PRIM2P49643 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PRIM2P49643 DUX4L18-201ENST00000553347 1267 ntBASIC21.79■■□□□ 1.08
PRIM2P49643 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.79■■□□□ 1.08
PRIM2P49643 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRIM2P49643 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRIM2P49643 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.79■■□□□ 1.08
PRIM2P49643 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.79■■□□□ 1.08
PRIM2P49643 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRIM2P49643 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PRIM2P49643 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRIM2P49643 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
PRIM2P49643 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRIM2P49643 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.78■■□□□ 1.08
PRIM2P49643 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.78■■□□□ 1.08
PRIM2P49643 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRIM2P49643 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PRIM2P49643 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PRIM2P49643 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.77■■□□□ 1.08
PRIM2P49643 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.77■■□□□ 1.08
PRIM2P49643 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.77■■□□□ 1.08
PRIM2P49643 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.77■■□□□ 1.08
PRIM2P49643 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.77■■□□□ 1.08
PRIM2P49643 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
PRIM2P49643 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
PRIM2P49643 AC012676.1-201ENST00000574705 1949 ntBASIC21.76■■□□□ 1.07
PRIM2P49643 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PRIM2P49643 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRIM2P49643 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRIM2P49643 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRIM2P49643 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PRIM2P49643 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRIM2P49643 AC004987.1-201ENST00000428627 508 ntBASIC21.75■■□□□ 1.07
PRIM2P49643 ATP5G2P3-201ENST00000429083 425 ntBASIC21.75■■□□□ 1.07
PRIM2P49643 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRIM2P49643 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRIM2P49643 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.74■■□□□ 1.07
PRIM2P49643 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PRIM2P49643 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRIM2P49643 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
PRIM2P49643 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PRIM2P49643 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRIM2P49643 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.73■■□□□ 1.07
PRIM2P49643 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PRIM2P49643 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
PRIM2P49643 AC090877.2-201ENST00000558441 1738 ntBASIC21.73■■□□□ 1.07
PRIM2P49643 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms