Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.054e-7■■■□□ 18.4
XRCC6P12956 NADK-213ENST00000492845 937 ntTSL 219.76■□□□□ 0.754e-7■■■□□ 18.4
XRCC6P12956 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.344e-7■■■□□ 18.4
XRCC6P12956 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.24e-7■■■□□ 18.4
XRCC6P12956 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.114e-7■■■□□ 18.4
XRCC6P12956 NADK-204ENST00000378625 3653 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.094e-7■■■□□ 18.4
XRCC6P12956 TMEM245-205ENST00000491854 2435 ntTSL 29.85□□□□□ -0.834e-7■■■□□ 18.4
XRCC6P12956 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.691e-8■■■□□ 18.4
XRCC6P12956 CDK19-208ENST00000497709 1117 ntTSL 317.08■□□□□ 0.321e-8■■■□□ 18.4
XRCC6P12956 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC9.68□□□□□ -0.861e-8■■■□□ 18.4
XRCC6P12956 NUP214-224ENST00000530863 560 ntTSL 55.24□□□□□ -1.571e-7■■■□□ 18.3
XRCC6P12956 NUP214-223ENST00000530843 189 ntTSL 54.67□□□□□ -1.661e-7■■■□□ 18.3
XRCC6P12956 GLUL-210ENST00000484996 1369 ntTSL 323.36■■□□□ 1.334e-6■■■□□ 18.3
XRCC6P12956 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.784e-6■■■□□ 18.3
XRCC6P12956 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.634e-6■■■□□ 18.3
XRCC6P12956 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.454e-6■■■□□ 18.3
XRCC6P12956 GLUL-207ENST00000463851 939 ntTSL 311.3□□□□□ -0.64e-6■■■□□ 18.3
XRCC6P12956 GLUL-211ENST00000489818 683 ntTSL 310.98□□□□□ -0.654e-6■■■□□ 18.3
XRCC6P12956 GLUL-206ENST00000462444 793 ntTSL 29.88□□□□□ -0.834e-6■■■□□ 18.3
XRCC6P12956 GLUL-209ENST00000480604 908 ntTSL 58.91□□□□□ -0.984e-6■■■□□ 18.3
XRCC6P12956 PCNT-205ENST00000480896 10485 ntTSL 1 (best)12.65□□□□□ -0.383e-6■■■□□ 18.2
XRCC6P12956 PCNT-201ENST00000359568 10560 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.423e-6■■■□□ 18.2
XRCC6P12956 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC35.16■■■■□ 3.224e-16■■■□□ 18.2
XRCC6P12956 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC29.4■■■□□ 2.34e-16■■■□□ 18.2
XRCC6P12956 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC25.22■■□□□ 1.634e-16■■■□□ 18.2
XRCC6P12956 PABPN1-206ENST00000556809 969 ntTSL 225.04■■□□□ 1.64e-16■■■□□ 18.2
XRCC6P12956 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.464e-16■■■□□ 18.2
XRCC6P12956 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.144e-16■■■□□ 18.2
XRCC6P12956 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.754e-6■■■□□ 18.2
XRCC6P12956 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC23.72■■□□□ 1.394e-6■■■□□ 18.2
XRCC6P12956 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.865e-6■■■□□ 18.1
XRCC6P12956 NKD1-202ENST00000564336 477 ntTSL 325.14■■□□□ 1.623e-11■■■□□ 18.1
XRCC6P12956 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.623e-11■■■□□ 18.1
XRCC6P12956 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.064e-6■■■□□ 18.1
XRCC6P12956 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.684e-6■■■□□ 18.1
XRCC6P12956 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.544e-6■■■□□ 18.1
XRCC6P12956 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.54e-6■■■□□ 18.1
XRCC6P12956 NFE2-205ENST00000553198 1208 ntTSL 517.04■□□□□ 0.324e-6■■■□□ 18.1
XRCC6P12956 KDM6A-207ENST00000475233 612 ntTSL 519.84■□□□□ 0.779e-9■■■□□ 18.1
XRCC6P12956 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.053e-11■■■□□ 18.1
XRCC6P12956 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC21.36■■□□□ 1.013e-7■■■□□ 18.1
XRCC6P12956 PIP5K1A-209ENST00000454769 540 ntTSL 420.92■□□□□ 0.943e-7■■■□□ 18.1
XRCC6P12956 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.623e-7■■■□□ 18.1
XRCC6P12956 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.273e-7■■■□□ 18.1
XRCC6P12956 PIP5K1A-201ENST00000349792 3767 ntAPPRIS P3 TSL 1 (best)15.04■□□□□ -03e-7■■■□□ 18.1
XRCC6P12956 PIP5K1A-203ENST00000368890 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.023e-7■■■□□ 18.1
XRCC6P12956 PIP5K1A-208ENST00000447555 373 ntTSL 1 (best)7.32□□□□□ -1.243e-7■■■□□ 18.1
XRCC6P12956 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.054e-11■■■□□ 18.1
XRCC6P12956 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.834e-11■■■□□ 18.1
XRCC6P12956 GANAB-214ENST00000534613 737 ntTSL 517.16■□□□□ 0.343e-6■■■□□ 18
XRCC6P12956 GANAB-215ENST00000534779 2626 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.073e-6■■■□□ 18
XRCC6P12956 GANAB-216ENST00000540933 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.083e-6■■■□□ 18
XRCC6P12956 GANAB-207ENST00000526732 824 ntTSL 213.95□□□□□ -0.183e-6■■■□□ 18
XRCC6P12956 GANAB-213ENST00000534422 702 ntTSL 512.8□□□□□ -0.363e-6■■■□□ 18
XRCC6P12956 GANAB-201ENST00000346178 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.473e-6■■■□□ 18
XRCC6P12956 GANAB-211ENST00000532402 3718 ntTSL 1 (best)11.79□□□□□ -0.523e-6■■■□□ 18
XRCC6P12956 GANAB-202ENST00000356638 3608 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.523e-6■■■□□ 18
XRCC6P12956 RPL4-216ENST00000569438 565 ntTSL 515.96■□□□□ 0.157e-15■■■□□ 17.9
XRCC6P12956 RPL4-212ENST00000566622 817 ntTSL 215.11■□□□□ 0.017e-15■■■□□ 17.9
XRCC6P12956 RPL4-205ENST00000564439 582 ntTSL 311.98□□□□□ -0.497e-15■■■□□ 17.9
XRCC6P12956 IGF1R-210ENST00000559925 2280 ntTSL 1 (best)18.2■□□□□ 0.55e-8■■■□□ 17.9
XRCC6P12956 IGF1R-201ENST00000268035 11803 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.45e-8■■■□□ 17.9
XRCC6P12956 IGF1R-204ENST00000558355 572 ntTSL 212.55□□□□□ -0.45e-8■■■□□ 17.9
XRCC6P12956 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.835e-8■■■□□ 17.9
XRCC6P12956 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.461e-6■■■□□ 17.9
XRCC6P12956 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC22.61■■□□□ 1.211e-6■■■□□ 17.9
XRCC6P12956 RBM14-207ENST00000461478 693 ntTSL 223.41■■□□□ 1.345e-8■■■□□ 17.9
XRCC6P12956 RBM14-206ENST00000460762 459 ntTSL 222.44■■□□□ 1.185e-8■■■□□ 17.9
XRCC6P12956 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.85e-8■■■□□ 17.9
XRCC6P12956 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.13■□□□□ 0.655e-8■■■□□ 17.9
XRCC6P12956 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC14.76□□□□□ -0.055e-8■■■□□ 17.9
XRCC6P12956 RBM14-205ENST00000443702 732 ntTSL 3 BASIC14.57□□□□□ -0.085e-8■■■□□ 17.9
XRCC6P12956 RBM14-203ENST00000409372 876 ntTSL 2 BASIC13.66□□□□□ -0.225e-8■■■□□ 17.9
XRCC6P12956 SF1-220ENST00000626028 704 ntTSL 2 BASIC25■■□□□ 1.591e-7■■■□□ 17.8
XRCC6P12956 SF1-221ENST00000633899 591 ntTSL 423.26■■□□□ 1.311e-7■■■□□ 17.8
XRCC6P12956 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.211e-7■■■□□ 17.8
XRCC6P12956 TRIP12-202ENST00000343290 583 ntTSL 320.29■□□□□ 0.841e-7■■■□□ 17.8
XRCC6P12956 SF1-207ENST00000413951 623 ntTSL 218.54■□□□□ 0.561e-7■■■□□ 17.8
XRCC6P12956 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.51e-7■■■□□ 17.8
XRCC6P12956 TRIP12-215ENST00000479037 2938 ntTSL 1 (best)18.12■□□□□ 0.491e-7■■■□□ 17.8
XRCC6P12956 TMEM14B-203ENST00000460341 565 ntTSL 418.08■□□□□ 0.481e-7■■■□□ 17.8
XRCC6P12956 SF1-211ENST00000448404 2778 ntTSL 1 (best)18.08■□□□□ 0.481e-7■■■□□ 17.8
XRCC6P12956 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.67■□□□□ 0.421e-7■■■□□ 17.8
XRCC6P12956 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC17.61■□□□□ 0.411e-7■■■□□ 17.8
XRCC6P12956 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC17.6■□□□□ 0.411e-7■■■□□ 17.8
XRCC6P12956 SF1-208ENST00000432725 475 ntTSL 417.6■□□□□ 0.411e-7■■■□□ 17.8
XRCC6P12956 TMEM14B-206ENST00000463448 1589 ntTSL 1 (best)16.67■□□□□ 0.261e-7■■■□□ 17.8
XRCC6P12956 TMEM14B-209ENST00000473166 752 ntTSL 316.36■□□□□ 0.211e-7■■■□□ 17.8
XRCC6P12956 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.191e-7■■■□□ 17.8
XRCC6P12956 SF1-204ENST00000377390 3470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.061e-7■■■□□ 17.8
XRCC6P12956 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC14.49□□□□□ -0.091e-7■■■□□ 17.8
XRCC6P12956 TRIP12-208ENST00000430954 719 ntTSL 213.94□□□□□ -0.181e-7■■■□□ 17.8
XRCC6P12956 TMEM14B-211ENST00000473807 559 ntTSL 413.78□□□□□ -0.21e-7■■■□□ 17.8
XRCC6P12956 TMEM14B-213ENST00000478732 344 ntTSL 513.65□□□□□ -0.221e-7■■■□□ 17.8
XRCC6P12956 TRIP12-203ENST00000389044 6405 ntTSL 1 (best) BASIC11.87□□□□□ -0.511e-7■■■□□ 17.8
XRCC6P12956 TMEM14B-205ENST00000463100 502 ntTSL 411.75□□□□□ -0.531e-7■■■□□ 17.8
XRCC6P12956 TRIP12-209ENST00000435716 603 ntTSL 39.87□□□□□ -0.831e-7■■■□□ 17.8
XRCC6P12956 TRIP12-207ENST00000428959 584 ntTSL 39.45□□□□□ -0.91e-7■■■□□ 17.8
XRCC6P12956 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.191e-7■■■□□ 17.8
XRCC6P12956 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.261e-7■■■□□ 17.8
Retrieved 100 of 6,788 protein–RNA pairs in 80.4 ms