Protein–RNA interactions for Protein: O60906

SMPD2, Sphingomyelin phosphodiesterase 2, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2O60906 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.22■□□□□ 0.83
SMPD2O60906 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.22■□□□□ 0.83
SMPD2O60906 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMPD2O60906 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMPD2O60906 AC090877.2-201ENST00000558441 1738 ntBASIC20.22■□□□□ 0.83
SMPD2O60906 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMPD2O60906 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SMPD2O60906 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.21■□□□□ 0.83
SMPD2O60906 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMPD2O60906 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMPD2O60906 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMPD2O60906 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMPD2O60906 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMPD2O60906 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMPD2O60906 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SMPD2O60906 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.2■□□□□ 0.82
SMPD2O60906 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.2■□□□□ 0.82
SMPD2O60906 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMPD2O60906 AC138932.3-201ENST00000567634 1902 ntBASIC20.2■□□□□ 0.82
SMPD2O60906 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SMPD2O60906 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SMPD2O60906 MIR3621-201ENST00000580529 85 ntBASIC20.2■□□□□ 0.82
SMPD2O60906 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SMPD2O60906 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SMPD2O60906 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SMPD2O60906 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SMPD2O60906 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.2■□□□□ 0.82
SMPD2O60906 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.2■□□□□ 0.82
SMPD2O60906 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
SMPD2O60906 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMPD2O60906 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
SMPD2O60906 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.19■□□□□ 0.82
SMPD2O60906 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.19■□□□□ 0.82
SMPD2O60906 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.19■□□□□ 0.82
SMPD2O60906 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.19■□□□□ 0.82
SMPD2O60906 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.19■□□□□ 0.82
SMPD2O60906 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.19■□□□□ 0.82
SMPD2O60906 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMPD2O60906 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMPD2O60906 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMPD2O60906 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMPD2O60906 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.18■□□□□ 0.82
SMPD2O60906 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SMPD2O60906 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMPD2O60906 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMPD2O60906 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.18■□□□□ 0.82
SMPD2O60906 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMPD2O60906 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.17■□□□□ 0.82
SMPD2O60906 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMPD2O60906 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.17■□□□□ 0.82
SMPD2O60906 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMPD2O60906 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMPD2O60906 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.17■□□□□ 0.82
SMPD2O60906 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMPD2O60906 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SMPD2O60906 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMPD2O60906 AP003733.4-201ENST00000623785 1697 ntBASIC20.16■□□□□ 0.82
SMPD2O60906 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMPD2O60906 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.16■□□□□ 0.82
SMPD2O60906 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SMPD2O60906 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.16■□□□□ 0.82
SMPD2O60906 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
SMPD2O60906 AC096631.2-201ENST00000436136 790 ntBASIC20.16■□□□□ 0.82
SMPD2O60906 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.16■□□□□ 0.82
SMPD2O60906 AC110285.6-201ENST00000617652 491 ntBASIC20.16■□□□□ 0.82
SMPD2O60906 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.16■□□□□ 0.82
SMPD2O60906 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
SMPD2O60906 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.16■□□□□ 0.82
SMPD2O60906 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.16■□□□□ 0.82
SMPD2O60906 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
SMPD2O60906 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMPD2O60906 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SMPD2O60906 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMPD2O60906 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.15■□□□□ 0.82
SMPD2O60906 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SMPD2O60906 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.15■□□□□ 0.82
SMPD2O60906 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.15■□□□□ 0.82
SMPD2O60906 AC005837.3-201ENST00000612163 286 ntBASIC20.15■□□□□ 0.82
SMPD2O60906 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SMPD2O60906 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.15■□□□□ 0.82
SMPD2O60906 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SMPD2O60906 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SMPD2O60906 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SMPD2O60906 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.14■□□□□ 0.81
SMPD2O60906 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.14■□□□□ 0.81
SMPD2O60906 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMPD2O60906 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.14■□□□□ 0.81
SMPD2O60906 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMPD2O60906 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
SMPD2O60906 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SMPD2O60906 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SMPD2O60906 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMPD2O60906 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.13■□□□□ 0.81
SMPD2O60906 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.13■□□□□ 0.81
SMPD2O60906 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.13■□□□□ 0.81
SMPD2O60906 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SMPD2O60906 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.13■□□□□ 0.81
SMPD2O60906 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.13■□□□□ 0.81
SMPD2O60906 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMPD2O60906 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms