Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
AP3D1O14617 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.46■■□□□ 1.03
AP3D1O14617 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
AP3D1O14617 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
AP3D1O14617 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
AP3D1O14617 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
AP3D1O14617 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.46■■□□□ 1.03
AP3D1O14617 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
AP3D1O14617 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
AP3D1O14617 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.45■■□□□ 1.02
AP3D1O14617 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
AP3D1O14617 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
AP3D1O14617 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
AP3D1O14617 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
AP3D1O14617 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.45■■□□□ 1.02
AP3D1O14617 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.45■■□□□ 1.02
AP3D1O14617 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
AP3D1O14617 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
AP3D1O14617 AC012676.1-201ENST00000574705 1949 ntBASIC21.45■■□□□ 1.02
AP3D1O14617 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
AP3D1O14617 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
AP3D1O14617 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
AP3D1O14617 HLA-L-211ENST00000482052 1765 ntBASIC21.44■■□□□ 1.02
AP3D1O14617 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
AP3D1O14617 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
AP3D1O14617 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
AP3D1O14617 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.43■■□□□ 1.02
AP3D1O14617 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.43■■□□□ 1.02
AP3D1O14617 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
AP3D1O14617 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.43■■□□□ 1.02
AP3D1O14617 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
AP3D1O14617 CLDN5-201ENST00000403084 2357 ntBASIC21.43■■□□□ 1.02
AP3D1O14617 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
AP3D1O14617 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
AP3D1O14617 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.42■■□□□ 1.02
AP3D1O14617 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
AP3D1O14617 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
AP3D1O14617 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
AP3D1O14617 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
AP3D1O14617 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.42■■□□□ 1.02
AP3D1O14617 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.42■■□□□ 1.02
AP3D1O14617 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
AP3D1O14617 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
AP3D1O14617 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
AP3D1O14617 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
AP3D1O14617 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
AP3D1O14617 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
AP3D1O14617 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
AP3D1O14617 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
AP3D1O14617 AC004812.2-201ENST00000611079 2094 ntBASIC21.4■■□□□ 1.02
AP3D1O14617 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
AP3D1O14617 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
AP3D1O14617 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
AP3D1O14617 AC004987.1-201ENST00000428627 508 ntBASIC21.4■■□□□ 1.02
AP3D1O14617 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.4■■□□□ 1.02
AP3D1O14617 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
AP3D1O14617 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.4■■□□□ 1.02
AP3D1O14617 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
AP3D1O14617 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
AP3D1O14617 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.4■■□□□ 1.02
AP3D1O14617 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
AP3D1O14617 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
AP3D1O14617 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
AP3D1O14617 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
AP3D1O14617 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
AP3D1O14617 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
AP3D1O14617 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
AP3D1O14617 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
AP3D1O14617 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
AP3D1O14617 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
AP3D1O14617 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
AP3D1O14617 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
AP3D1O14617 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.38■■□□□ 1.01
AP3D1O14617 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.38■■□□□ 1.01
AP3D1O14617 ATP5G2P3-201ENST00000429083 425 ntBASIC21.38■■□□□ 1.01
AP3D1O14617 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.38■■□□□ 1.01
AP3D1O14617 LONRF2P2-201ENST00000439212 571 ntBASIC21.38■■□□□ 1.01
AP3D1O14617 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.38■■□□□ 1.01
AP3D1O14617 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
AP3D1O14617 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.38■■□□□ 1.01
AP3D1O14617 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
AP3D1O14617 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
AP3D1O14617 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
AP3D1O14617 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
AP3D1O14617 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.38■■□□□ 1.01
AP3D1O14617 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
AP3D1O14617 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
AP3D1O14617 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
AP3D1O14617 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
AP3D1O14617 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.37■■□□□ 1.01
AP3D1O14617 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
AP3D1O14617 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
AP3D1O14617 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
AP3D1O14617 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
AP3D1O14617 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
AP3D1O14617 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.36■■□□□ 1.01
AP3D1O14617 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.36■■□□□ 1.01
AP3D1O14617 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.36■■□□□ 1.01
AP3D1O14617 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
AP3D1O14617 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms