Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.32
CHKB-CPT1BH3BT56 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC13.02□□□□□ -0.33
CHKB-CPT1BH3BT56 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CHKB-CPT1BH3BT56 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CHKB-CPT1BH3BT56 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CHKB-CPT1BH3BT56 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CHKB-CPT1BH3BT56 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CHKB-CPT1BH3BT56 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHKB-CPT1BH3BT56 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHKB-CPT1BH3BT56 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHKB-CPT1BH3BT56 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHKB-CPT1BH3BT56 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHKB-CPT1BH3BT56 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHKB-CPT1BH3BT56 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CHKB-CPT1BH3BT56 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC13.01□□□□□ -0.33
CHKB-CPT1BH3BT56 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHKB-CPT1BH3BT56 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHKB-CPT1BH3BT56 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CHKB-CPT1BH3BT56 AC092803.2-201ENST00000564287 1899 ntBASIC13.01□□□□□ -0.33
CHKB-CPT1BH3BT56 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHKB-CPT1BH3BT56 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHKB-CPT1BH3BT56 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CHKB-CPT1BH3BT56 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CHKB-CPT1BH3BT56 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHKB-CPT1BH3BT56 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHKB-CPT1BH3BT56 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHKB-CPT1BH3BT56 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
CHKB-CPT1BH3BT56 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CHKB-CPT1BH3BT56 MYB-221ENST00000527615 2381 ntTSL 5 BASIC13□□□□□ -0.33
CHKB-CPT1BH3BT56 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC13□□□□□ -0.33
CHKB-CPT1BH3BT56 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CHKB-CPT1BH3BT56 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHKB-CPT1BH3BT56 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13□□□□□ -0.33
CHKB-CPT1BH3BT56 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHKB-CPT1BH3BT56 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CHKB-CPT1BH3BT56 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC13□□□□□ -0.33
CHKB-CPT1BH3BT56 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CHKB-CPT1BH3BT56 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHKB-CPT1BH3BT56 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CHKB-CPT1BH3BT56 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHKB-CPT1BH3BT56 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CHKB-CPT1BH3BT56 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHKB-CPT1BH3BT56 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHKB-CPT1BH3BT56 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC12.99□□□□□ -0.33
CHKB-CPT1BH3BT56 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHKB-CPT1BH3BT56 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC12.99□□□□□ -0.33
CHKB-CPT1BH3BT56 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC12.99□□□□□ -0.33
CHKB-CPT1BH3BT56 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHKB-CPT1BH3BT56 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CHKB-CPT1BH3BT56 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CHKB-CPT1BH3BT56 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC12.99□□□□□ -0.33
CHKB-CPT1BH3BT56 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC12.99□□□□□ -0.33
CHKB-CPT1BH3BT56 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CHKB-CPT1BH3BT56 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CHKB-CPT1BH3BT56 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
CHKB-CPT1BH3BT56 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CHKB-CPT1BH3BT56 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CHKB-CPT1BH3BT56 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC12.98□□□□□ -0.33
CHKB-CPT1BH3BT56 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHKB-CPT1BH3BT56 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHKB-CPT1BH3BT56 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHKB-CPT1BH3BT56 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
CHKB-CPT1BH3BT56 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHKB-CPT1BH3BT56 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHKB-CPT1BH3BT56 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHKB-CPT1BH3BT56 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CHKB-CPT1BH3BT56 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHKB-CPT1BH3BT56 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHKB-CPT1BH3BT56 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CHKB-CPT1BH3BT56 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHKB-CPT1BH3BT56 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
CHKB-CPT1BH3BT56 DUSP8P4-201ENST00000399538 1761 ntBASIC12.97□□□□□ -0.33
CHKB-CPT1BH3BT56 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC12.97□□□□□ -0.33
CHKB-CPT1BH3BT56 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHKB-CPT1BH3BT56 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
CHKB-CPT1BH3BT56 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CHKB-CPT1BH3BT56 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC12.97□□□□□ -0.33
CHKB-CPT1BH3BT56 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CHKB-CPT1BH3BT56 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHKB-CPT1BH3BT56 FER1L4-210ENST00000615531 5998 ntBASIC12.96□□□□□ -0.33
CHKB-CPT1BH3BT56 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC12.96□□□□□ -0.33
CHKB-CPT1BH3BT56 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CHKB-CPT1BH3BT56 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CHKB-CPT1BH3BT56 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC12.96□□□□□ -0.34
CHKB-CPT1BH3BT56 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
CHKB-CPT1BH3BT56 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CHKB-CPT1BH3BT56 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
CHKB-CPT1BH3BT56 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CHKB-CPT1BH3BT56 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CHKB-CPT1BH3BT56 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
CHKB-CPT1BH3BT56 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CHKB-CPT1BH3BT56 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CHKB-CPT1BH3BT56 C1orf229-201ENST00000623686 2258 ntBASIC12.95□□□□□ -0.34
CHKB-CPT1BH3BT56 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CHKB-CPT1BH3BT56 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CHKB-CPT1BH3BT56 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CHKB-CPT1BH3BT56 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CHKB-CPT1BH3BT56 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CHKB-CPT1BH3BT56 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CHKB-CPT1BH3BT56 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms