Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 AC134915.1-201ENST00000426461 574 ntBASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 RPL13AP25-201ENST00000484130 612 ntBASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 AC020658.6-201ENST00000623564 1870 ntBASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 INTS4P2-202ENST00000614726 2019 ntBASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 USP32P1-208ENST00000506594 1164 ntBASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms