Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 INTS4P1-203ENST00000641008 3683 ntBASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 GHSR-202ENST00000427970 912 ntBASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 DUX4L27-201ENST00000554796 1261 ntBASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 AL158211.3-201ENST00000607385 239 ntBASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 AL590560.3-201ENST00000623350 461 ntBASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 AL009178.2-201ENST00000597278 2719 ntBASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 KRT18P28-201ENST00000453838 1332 ntBASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 AC015656.1-201ENST00000624209 3578 ntBASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 TOMM22P5-201ENST00000416399 439 ntBASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 AC139530.3-201ENST00000620344 690 ntBASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 AC004461.2-201ENST00000629517 803 ntBASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00346Q8IVM7 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms