Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AC012306.2-201ENST00000609350 630 ntBASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 CCNC-219ENST00000627680 896 ntTSL 5 BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CROCCP3Q8IVE0 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 PMS2P4-201ENST00000412466 1052 ntBASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 AC106795.1-205ENST00000512851 1056 ntBASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 LTBR-211ENST00000543190 785 ntTSL 3 BASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 MIR4321-201ENST00000592276 80 ntBASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 AL591684.3-201ENST00000605187 298 ntBASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.96□□□□□ -0.17
CROCCP3Q8IVE0 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CROCCP3Q8IVE0 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
CROCCP3Q8IVE0 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CROCCP3Q8IVE0 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CROCCP3Q8IVE0 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CROCCP3Q8IVE0 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CROCCP3Q8IVE0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.96□□□□□ -0.18
CROCCP3Q8IVE0 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CROCCP3Q8IVE0 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CROCCP3Q8IVE0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.95□□□□□ -0.18
CROCCP3Q8IVE0 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.95□□□□□ -0.18
CROCCP3Q8IVE0 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CROCCP3Q8IVE0 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CROCCP3Q8IVE0 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CROCCP3Q8IVE0 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.95□□□□□ -0.18
CROCCP3Q8IVE0 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CROCCP3Q8IVE0 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.95□□□□□ -0.18
CROCCP3Q8IVE0 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CROCCP3Q8IVE0 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CROCCP3Q8IVE0 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CROCCP3Q8IVE0 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CROCCP3Q8IVE0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CROCCP3Q8IVE0 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CROCCP3Q8IVE0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CROCCP3Q8IVE0 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CROCCP3Q8IVE0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CROCCP3Q8IVE0 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CROCCP3Q8IVE0 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CROCCP3Q8IVE0 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CROCCP3Q8IVE0 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.95□□□□□ -0.18
CROCCP3Q8IVE0 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CROCCP3Q8IVE0 RBM17P3-201ENST00000417687 1192 ntBASIC13.95□□□□□ -0.18
CROCCP3Q8IVE0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CROCCP3Q8IVE0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.95□□□□□ -0.18
CROCCP3Q8IVE0 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.95□□□□□ -0.18
CROCCP3Q8IVE0 AP002469.2-201ENST00000531724 424 ntBASIC13.95□□□□□ -0.18
CROCCP3Q8IVE0 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms