Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 EIF3FP3-201ENST00000434851 1086 ntBASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 SERBP1P2-201ENST00000436888 1164 ntBASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 MIR4783-201ENST00000580343 82 ntBASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 AC107464.3-201ENST00000609172 737 ntBASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 AC073592.2-201ENST00000623062 780 ntBASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 KRT8P14-201ENST00000414254 1442 ntBASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
RSPO4Q2I0M5 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.71□□□□□ -0.06
RSPO4Q2I0M5 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.71□□□□□ -0.06
RSPO4Q2I0M5 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
RSPO4Q2I0M5 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RSPO4Q2I0M5 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RSPO4Q2I0M5 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 CHCHD2P9-201ENST00000461726 456 ntBASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 AC008805.1-201ENST00000590892 364 ntBASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 AC009955.4-201ENST00000597192 544 ntBASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO4Q2I0M5 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 OR6D1P-203ENST00000641209 4860 ntBASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 UROS-201ENST00000368774 744 ntTSL 2 BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 HLA-J-204ENST00000495278 958 ntBASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 SCARNA21-201ENST00000517026 139 ntBASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 AC027139.1-201ENST00000565286 951 ntBASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms