Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBP1P09455 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.16■□□□□ 0.02
RBP1P09455 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBP1P09455 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.16■□□□□ 0.02
RBP1P09455 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.16■□□□□ 0.02
RBP1P09455 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBP1P09455 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBP1P09455 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBP1P09455 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RBP1P09455 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBP1P09455 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RBP1P09455 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RBP1P09455 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RBP1P09455 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
RBP1P09455 AC007787.1-201ENST00000588095 1583 ntBASIC15.15■□□□□ 0.02
RBP1P09455 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RBP1P09455 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
RBP1P09455 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RBP1P09455 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RBP1P09455 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RBP1P09455 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RBP1P09455 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RBP1P09455 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RBP1P09455 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RBP1P09455 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.15■□□□□ 0.02
RBP1P09455 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.15■□□□□ 0.02
RBP1P09455 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.15■□□□□ 0.02
RBP1P09455 CNN2P2-201ENST00000443536 909 ntBASIC15.15■□□□□ 0.02
RBP1P09455 CNN2P3-201ENST00000450201 906 ntBASIC15.15■□□□□ 0.02
RBP1P09455 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RBP1P09455 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RBP1P09455 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.15■□□□□ 0.02
RBP1P09455 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RBP1P09455 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.15■□□□□ 0.02
RBP1P09455 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.15■□□□□ 0.02
RBP1P09455 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.15■□□□□ 0.02
RBP1P09455 AL136317.3-201ENST00000618497 906 ntBASIC15.15■□□□□ 0.02
RBP1P09455 AC073592.8-201ENST00000624126 511 ntBASIC15.15■□□□□ 0.02
RBP1P09455 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.15■□□□□ 0.02
RBP1P09455 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.15■□□□□ 0.02
RBP1P09455 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RBP1P09455 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RBP1P09455 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RBP1P09455 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RBP1P09455 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RBP1P09455 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RBP1P09455 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.15■□□□□ 0.02
RBP1P09455 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RBP1P09455 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RBP1P09455 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.15■□□□□ 0.02
RBP1P09455 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RBP1P09455 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RBP1P09455 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RBP1P09455 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.15■□□□□ 0.02
RBP1P09455 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBP1P09455 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBP1P09455 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBP1P09455 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.14■□□□□ 0.01
RBP1P09455 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
RBP1P09455 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBP1P09455 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RBP1P09455 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.14■□□□□ 0.01
RBP1P09455 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBP1P09455 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RBP1P09455 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
RBP1P09455 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RBP1P09455 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RBP1P09455 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.14■□□□□ 0.01
RBP1P09455 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBP1P09455 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBP1P09455 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBP1P09455 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBP1P09455 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBP1P09455 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RBP1P09455 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBP1P09455 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RBP1P09455 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.14■□□□□ 0.01
RBP1P09455 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.14■□□□□ 0.01
RBP1P09455 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBP1P09455 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.14■□□□□ 0.01
RBP1P09455 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
RBP1P09455 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.14■□□□□ 0.01
RBP1P09455 AC000095.1-201ENST00000603208 874 ntBASIC15.14■□□□□ 0.01
RBP1P09455 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.14■□□□□ 0.01
RBP1P09455 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.14■□□□□ 0.01
RBP1P09455 AL109936.8-201ENST00000641772 604 ntBASIC15.14■□□□□ 0.01
RBP1P09455 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RBP1P09455 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBP1P09455 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RBP1P09455 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.14■□□□□ 0.01
RBP1P09455 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RBP1P09455 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBP1P09455 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.14■□□□□ 0.01
RBP1P09455 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RBP1P09455 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBP1P09455 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.14■□□□□ 0.01
RBP1P09455 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.14■□□□□ 0.01
RBP1P09455 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBP1P09455 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBP1P09455 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms