Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
GPC4O75487 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
GPC4O75487 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.47■□□□□ 0.07
GPC4O75487 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GPC4O75487 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
GPC4O75487 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
GPC4O75487 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.47■□□□□ 0.07
GPC4O75487 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
GPC4O75487 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
GPC4O75487 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
GPC4O75487 AC007686.3-201ENST00000619017 3487 ntBASIC15.47■□□□□ 0.07
GPC4O75487 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
GPC4O75487 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
GPC4O75487 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
GPC4O75487 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.46■□□□□ 0.07
GPC4O75487 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.46■□□□□ 0.07
GPC4O75487 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.46■□□□□ 0.07
GPC4O75487 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GPC4O75487 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GPC4O75487 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GPC4O75487 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
GPC4O75487 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.46■□□□□ 0.07
GPC4O75487 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
GPC4O75487 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.46■□□□□ 0.07
GPC4O75487 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.46■□□□□ 0.07
GPC4O75487 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
GPC4O75487 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GPC4O75487 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
GPC4O75487 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GPC4O75487 MRPS18AP1-201ENST00000414458 589 ntBASIC15.46■□□□□ 0.07
GPC4O75487 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.46■□□□□ 0.07
GPC4O75487 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.46■□□□□ 0.07
GPC4O75487 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
GPC4O75487 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.46■□□□□ 0.07
GPC4O75487 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.46■□□□□ 0.07
GPC4O75487 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
GPC4O75487 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.46■□□□□ 0.07
GPC4O75487 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
GPC4O75487 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.46■□□□□ 0.07
GPC4O75487 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
GPC4O75487 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.46■□□□□ 0.07
GPC4O75487 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
GPC4O75487 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.46■□□□□ 0.07
GPC4O75487 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.46■□□□□ 0.07
GPC4O75487 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
GPC4O75487 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
GPC4O75487 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.06
GPC4O75487 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
GPC4O75487 LINC01101-201ENST00000622953 1884 ntBASIC15.46■□□□□ 0.06
GPC4O75487 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
GPC4O75487 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.46■□□□□ 0.06
GPC4O75487 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.46■□□□□ 0.06
GPC4O75487 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
GPC4O75487 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.06
GPC4O75487 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GPC4O75487 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GPC4O75487 AC127383.1-201ENST00000444697 1800 ntBASIC15.45■□□□□ 0.06
GPC4O75487 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
GPC4O75487 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GPC4O75487 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.45■□□□□ 0.06
GPC4O75487 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
GPC4O75487 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
GPC4O75487 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GPC4O75487 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.45■□□□□ 0.06
GPC4O75487 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
GPC4O75487 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
GPC4O75487 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.45■□□□□ 0.06
GPC4O75487 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GPC4O75487 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GPC4O75487 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
GPC4O75487 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GPC4O75487 MIR770-201ENST00000390219 98 ntBASIC15.45■□□□□ 0.06
GPC4O75487 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
GPC4O75487 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.45■□□□□ 0.06
GPC4O75487 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.45■□□□□ 0.06
GPC4O75487 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.45■□□□□ 0.06
GPC4O75487 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.45■□□□□ 0.06
GPC4O75487 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
GPC4O75487 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.45■□□□□ 0.06
GPC4O75487 SLED1-202ENST00000512051 380 ntBASIC15.45■□□□□ 0.06
GPC4O75487 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.45■□□□□ 0.06
GPC4O75487 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.45■□□□□ 0.06
GPC4O75487 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.45■□□□□ 0.06
GPC4O75487 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.45■□□□□ 0.06
GPC4O75487 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
GPC4O75487 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.45■□□□□ 0.06
GPC4O75487 LINC01115-203ENST00000606068 577 ntBASIC15.45■□□□□ 0.06
GPC4O75487 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.45■□□□□ 0.06
GPC4O75487 AC008738.7-201ENST00000609744 511 ntBASIC15.45■□□□□ 0.06
GPC4O75487 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.45■□□□□ 0.06
GPC4O75487 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
GPC4O75487 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GPC4O75487 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GPC4O75487 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.45■□□□□ 0.06
GPC4O75487 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
GPC4O75487 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.45■□□□□ 0.06
GPC4O75487 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.45■□□□□ 0.06
GPC4O75487 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
GPC4O75487 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GPC4O75487 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms