Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 PBK-203ENST00000522944 1499 ntTSL 2 BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 NR1I2-202ENST00000393716 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 SCN5A-203ENST00000413689 8504 ntAPPRIS ALT1 TSL 5 BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 SAPCD2P2-201ENST00000431719 1174 ntBASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 AC097658.1-201ENST00000475555 843 ntBASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 CA15P1-201ENST00000481698 905 ntBASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 AC023024.2-201ENST00000623561 1993 ntBASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 SLFNL1-202ENST00000359345 4310 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 FBN2-204ENST00000508053 11132 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 AC130686.1-201ENST00000622936 2466 ntBASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 OTOF-201ENST00000272371 7156 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 GPD1-201ENST00000301149 3082 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 PCGF3-213ENST00000620529 1899 ntBASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC8.46□□□□□ -1.05
CHKB-CPT1BH3BT56 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
CHKB-CPT1BH3BT56 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
CHKB-CPT1BH3BT56 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC8.46□□□□□ -1.05
CHKB-CPT1BH3BT56 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC8.46□□□□□ -1.05
CHKB-CPT1BH3BT56 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
CHKB-CPT1BH3BT56 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC8.46□□□□□ -1.05
CHKB-CPT1BH3BT56 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC8.46□□□□□ -1.05
CHKB-CPT1BH3BT56 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.05
CHKB-CPT1BH3BT56 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
CHKB-CPT1BH3BT56 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC8.46□□□□□ -1.05
CHKB-CPT1BH3BT56 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
CHKB-CPT1BH3BT56 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
CHKB-CPT1BH3BT56 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
CHKB-CPT1BH3BT56 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC8.46□□□□□ -1.05
CHKB-CPT1BH3BT56 LAMA4-205ENST00000389463 6297 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
CHKB-CPT1BH3BT56 ICA1L-222ENST00000617388 8151 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.05
CHKB-CPT1BH3BT56 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
CHKB-CPT1BH3BT56 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC8.46□□□□□ -1.05
CHKB-CPT1BH3BT56 FSCN1P1-201ENST00000568912 1481 ntBASIC8.46□□□□□ -1.05
CHKB-CPT1BH3BT56 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
CHKB-CPT1BH3BT56 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC8.46□□□□□ -1.05
CHKB-CPT1BH3BT56 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC8.46□□□□□ -1.05
CHKB-CPT1BH3BT56 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC8.46□□□□□ -1.05
CHKB-CPT1BH3BT56 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC8.46□□□□□ -1.05
CHKB-CPT1BH3BT56 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
CHKB-CPT1BH3BT56 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
CHKB-CPT1BH3BT56 CADM3-202ENST00000368125 3745 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
CHKB-CPT1BH3BT56 OSBP2-203ENST00000403222 3728 ntTSL 5 BASIC8.46□□□□□ -1.05
CHKB-CPT1BH3BT56 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC8.46□□□□□ -1.05
CHKB-CPT1BH3BT56 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
CHKB-CPT1BH3BT56 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.05
CHKB-CPT1BH3BT56 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 PES1-204ENST00000402284 2144 ntTSL 5 BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 PEMT-206ENST00000435340 960 ntTSL 5 BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 CR392000.1-201ENST00000624770 1228 ntBASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 ZNF25-201ENST00000302609 4139 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms